RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 FOXD3Q9UJU5 478 aaPredicted RBP13.82□□□□□ -0.2
SF3A2-204ENST00000589118 ANK3Q12955 4377 aaKnown RBP13.82□□□□□ -0.2
SF3A2-204ENST00000589118 SAP18O00422 153 aaKnown RBP13.81□□□□□ -0.2
SF3A2-204ENST00000589118 TAPBPO15533 448 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 SIAH2O43255 324 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 CLEC3AO75596 197 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 C1QAP02745 245 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 IGKV3-11P04433 115 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 BMP7P18075 431 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 PGAM1P18669 254 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 GNAZP19086 355 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 CD22P20273 847 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 CTSSP25774 331 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 TSNQ15631 228 aaKnown RBP13.81□□□□□ -0.2
SF3A2-204ENST00000589118 WIPI1Q5MNZ9 446 aaPredicted RBP13.81□□□□□ -0.2
SF3A2-204ENST00000589118 TEDDM1Q5T9Z0 273 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 FNDC7Q5VTL7 733 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 ARMC3Q5W041 872 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 NSUN5P2Q63ZY6 315 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 TRMT10BQ6PF06 316 aaKnown RBP13.81□□□□□ -0.2
SF3A2-204ENST00000589118 RNF175Q8N4F7 328 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 SPATA6LQ8N4H0 392 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 SPATA3Q8NHX4 192 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 SLC22A8Q8TCC7 542 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 ANKRD49Q8WVL7 239 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 ZNF592Q92610 1267 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 UCN3Q969E3 161 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 PERPQ96FX8 193 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 WDYHV1Q96HA8 205 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 RBM24Q9BX46 236 aaKnown RBP13.81□□□□□ -0.2
SF3A2-204ENST00000589118 UGT2B28Q9BY64 529 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 PPANQ9NQ55 473 aaKnown RBP13.81□□□□□ -0.2
SF3A2-204ENST00000589118 GALNT8Q9NY28 637 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 COPS7AQ9UBW8 275 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 PCDHGB3Q9Y5G1 929 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 WIF1Q9Y5W5 379 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 MED12LQ86YW9 2145 aa13.81□□□□□ -0.2
SF3A2-204ENST00000589118 SH3D21A4FU49 640 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 CLGNO14967 610 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 ARHGEF9O43307 516 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 SMPD2O60906 423 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 TRIM3O75382 744 aaPredicted RBP13.8□□□□□ -0.2
SF3A2-204ENST00000589118 ATP5A1P25705 553 aaKnown RBP13.8□□□□□ -0.2
SF3A2-204ENST00000589118 MSH2P43246 934 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 SLC6A12P48065 614 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 FBXW4P57775 412 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 HERVK_113P63132 956 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 ERVK-8P63133 956 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 EFTUD2Q15029 972 aaKnown RBP eCLIP13.8□□□□□ -0.23e-9■■■■■ 48.7
SF3A2-204ENST00000589118 TOMM20Q15388 145 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 CYP1B1Q16678 543 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 VASNQ6EMK4 673 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 DESI1Q6ICB0 168 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 YTHDF3Q7Z739 585 aaKnown RBP13.8□□□□□ -0.2
SF3A2-204ENST00000589118 ACOT4Q8N9L9 421 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 NUBPLQ8TB37 319 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 DIO2Q92813 273 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 MAGOHBQ96A72 148 aaKnown RBP13.8□□□□□ -0.2
SF3A2-204ENST00000589118 RHBDF1Q96CC6 855 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 NAP1L3Q99457 506 aaPredicted RBP13.8□□□□□ -0.2
SF3A2-204ENST00000589118 PIGQQ9BRB3 760 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 TMEM79Q9BSE2 394 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 ERVK-6Q9BXR3 956 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 PRDM14Q9GZV8 571 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 TRPS1Q9UHF7 1281 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 ERVK-19Q9WJR5 959 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 EXPH5Q8NEV8 1989 aa13.8□□□□□ -0.2
SF3A2-204ENST00000589118 A0A088AWK7 358 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 C2orf72A6NCS6 295 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 FBXO45P0C2W1 286 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 TMIGD3P0DMS9 266 aaPredicted RBP13.79□□□□□ -0.2
SF3A2-204ENST00000589118 NID1P14543 1247 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 ZNF10P21506 573 aaPredicted RBP13.79□□□□□ -0.2
SF3A2-204ENST00000589118 CPN2P22792 545 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 STT3AP46977 705 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 NAGLUP54802 743 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 SERTAD2Q14140 314 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 DOC2AQ14183 400 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 ZNF267Q14586 743 aaPredicted RBP13.79□□□□□ -0.2
SF3A2-204ENST00000589118 C18orf63Q68DL7 685 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 YRDCQ86U90 279 aaKnown RBP13.79□□□□□ -0.2
SF3A2-204ENST00000589118 CNTN4Q8IWV2 1026 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 PRR22Q8IZ63 422 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 KRT78Q8N1N4 520 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 SLC35F6Q8N357 371 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 ACTRT1Q8TDG2 376 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 HSPBAP1Q96EW2 488 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 CERS2Q96G23 380 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 CFAP36Q96G28 342 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 PDLIM5Q96HC4 596 aaKnown RBP13.79□□□□□ -0.2
SF3A2-204ENST00000589118 DGAT2Q96PD7 388 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 PSAT1Q9Y617 370 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 DSCAMO60469 2012 aa13.79□□□□□ -0.2
SF3A2-204ENST00000589118 HIVEP2P31629 2446 aa13.78□□□□□ -0.2
SF3A2-204ENST00000589118 A0A1W2PS29 197 aa13.78□□□□□ -0.2
SF3A2-204ENST00000589118 MBD3L4A6NDZ8 208 aaPredicted RBP13.78□□□□□ -0.2
SF3A2-204ENST00000589118 MBD3L3A6NE82 208 aaPredicted RBP13.78□□□□□ -0.2
SF3A2-204ENST00000589118 MBD3L5A6NJ08 208 aaPredicted RBP13.78□□□□□ -0.2
SF3A2-204ENST00000589118 FAM171A2A8MVW0 826 aa13.78□□□□□ -0.2
SF3A2-204ENST00000589118 PGRMC1O00264 195 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms