RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 VIPR2P41587 438 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 CTSKP43235 329 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 XCR1P46094 333 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 ALDH9A1P49189 494 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 CRYBA2P53672 197 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 PCBP3P57721 371 aaKnown RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 VBP1P61758 197 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 TRA2BP62995 288 aaKnown RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 KRT33BQ14525 404 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 SMN1Q16637 294 aaKnown RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 TIGD6Q17RP2 521 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 EXOC3L2Q2M3D2 409 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 NIPAL1Q6NVV3 410 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 C12orf40Q86WS4 652 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 HEATR4Q86WZ0 1026 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 NUDT13Q86X67 352 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 CENPSQ8N2Z9 138 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 DNAJC22Q8N4W6 341 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 OR5AR1Q8NGP9 310 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 OR5AK3PQ8NH89 298 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 GTPBP3Q969Y2 492 aaKnown RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 TAMM41Q96BW9 452 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF764Q96H86 408 aaPredicted RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 ACAT2Q9BWD1 397 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 FAIM2Q9BWQ8 316 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 MMP27Q9H306 513 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 A4GALTQ9NPC4 353 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 WASH6PQ9NQA3 447 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 ACSS1Q9NUB1 689 aaPredicted RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 GPATCH2Q9NW75 528 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 GDE1Q9NZC3 331 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 LMCD1Q9NZU5 365 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 KLHL3Q9UH77 587 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 TAC3Q9UHF0 121 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 HEPACAM2A8MVW5 462 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 E9PQ18 207 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 J3QRK9 145 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 MAN1A2O60476 641 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 SULT1C4O75897 302 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 PCDH8O95206 1070 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 C1QCP02747 245 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 RPLP0P05388 317 aaKnown RBP7.03□□□□□ -1.28
ZNF540-206ENST00000589117 GSTP1P09211 210 aaKnown RBP7.03□□□□□ -1.28
ZNF540-206ENST00000589117 ERGP11308 486 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 TPP2P29144 1249 aaPredicted RBP7.03□□□□□ -1.28
ZNF540-206ENST00000589117 EPHA2P29317 976 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 S100A5P33763 92 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 UGT2B10P36537 528 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 OPRL1P41146 370 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 SLC6A11P48066 632 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 PCBP4P57723 403 aaKnown RBP7.03□□□□□ -1.28
ZNF540-206ENST00000589117 EEF1A2Q05639 463 aaKnown RBP7.03□□□□□ -1.28
ZNF540-206ENST00000589117 AQP6Q13520 282 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 ATP1A4Q13733 1029 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 ADPRMQ3LIE5 342 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 TCEAL5Q5H9L2 206 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 TUBA3EQ6PEY2 450 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF852Q6ZMS4 543 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 USP43Q70EL4 1123 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 C11orf96Q7Z7L8 435 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 SYT9Q86SS6 491 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 LINC00471Q8N535 108 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF740Q8NDX6 193 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 KBTBD8Q8NFY9 601 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 OR4C15Q8NGM1 316 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 KISS1RQ969F8 398 aaPredicted RBP7.03□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF707Q96C28 371 aaPredicted RBP7.03□□□□□ -1.28
ZNF540-206ENST00000589117 LRRC3BQ96PB8 259 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 ALPK1Q96QP1 1244 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 MYOCQ99972 504 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 MS4A8Q9BY19 250 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 ACER3Q9NUN7 267 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 CNOT2Q9NZN8 540 aaKnown RBP7.03□□□□□ -1.28
ZNF540-206ENST00000589117 TAAR2Q9P1P5 351 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 TMEM98Q9Y2Y6 226 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 PCDHGA2Q9Y5H1 932 aa7.03□□□□□ -1.28
ZNF540-206ENST00000589117 LINC01553A4QN01 128 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 SAGE2PA6NJ88 616 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 PLPP1O14494 284 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 OR1F1O43749 312 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 ADAP00813 363 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 VIPP01282 170 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 NME1P15531 152 aaKnown RBP7.02□□□□□ -1.28
ZNF540-206ENST00000589117 CD6P30203 668 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 CASP9P55211 416 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 LSM3P62310 102 aaKnown RBP7.02□□□□□ -1.28
ZNF540-206ENST00000589117 CDK3Q00526 305 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 MLC1Q15049 377 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 INAQ16352 499 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 ANKDD1AQ495B1 522 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 TMEM35AQ53FP2 167 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 FAM78AQ5JUQ0 283 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 TMEM240Q5SV17 173 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 DCST1Q5T197 706 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 SAXO2Q658L1 398 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 FBXO46Q6PJ61 603 aaPredicted RBP7.02□□□□□ -1.28
ZNF540-206ENST00000589117 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.02□□□□□ -1.28
ZNF540-206ENST00000589117 PTCHD4Q6ZW05 846 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 NLRC3Q7RTR2 1065 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms