RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 STPG1Q5TH74 334 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 DNAJC14Q6Y2X3 702 aaPredicted RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 PIP4P1Q86T03 277 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 PTRH1Q86Y79 214 aaKnown RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 MSRB3Q8IXL7 192 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 MMP21Q8N119 569 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 OR2T12Q8NG77 320 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 OR5T3Q8NGG3 340 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 SFXN5Q8TD22 340 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 ZFP90Q8TF47 636 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 STMN2Q93045 179 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 CNRIP1Q96F85 164 aaPredicted RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 LRGUKQ96M69 825 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 ZNF681Q96N22 645 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 SLC35A5Q9BS91 424 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 GLIPR2Q9H4G4 154 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 PARD6AQ9NPB6 346 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 MKKSQ9NPJ1 570 aaPredicted RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 RXFP3Q9NSD7 469 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 MMACHCQ9Y4U1 282 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 EFCAB7A8K855 629 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 BCAS2O75934 225 aaPredicted RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 ATP1B1P05026 303 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 SLC35E2P0CK97 266 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 CPMP14384 443 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 HOXB6P17509 224 aaKnown RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 FBLP22087 321 aaKnown RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 GALNSP34059 522 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 CCT3P49368 545 aaKnown RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 MTPNP58546 118 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 SIM1P81133 766 aaPredicted RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 STX4Q12846 297 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 HSPB3Q12988 150 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 SLC13A2Q13183 592 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 FLOT2Q14254 428 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 DHFR2Q86XF0 187 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 CCDC116Q8IYX3 515 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 GOLM1Q8NBJ4 401 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 OR56A1Q8NGH5 318 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 OR52N2Q8NGI0 321 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 CCDC124Q96CT7 223 aaKnown RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 CLIP3Q96DZ5 547 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 RBM18Q96H35 190 aaKnown RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 ZNF583Q96ND8 569 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 DEPDC7Q96QD5 511 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 DENND2DQ9H6A0 471 aaPredicted RBP9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 MAGEL2Q9UJ55 1249 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 SNX8Q9Y5X2 465 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 SCN3AQ9NY46 2000 aa9.95□□□□□ -0.82
NEDD4L-224ENST00000588712 ELOVL7A1L3X0 281 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 FAM220BPB1ANY3 271 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 PLOD2O00469 737 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 GSTA4O15217 222 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 MGRN1O60291 552 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 ONECUT2O95948 504 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 FHP07954 510 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 AGXTP21549 392 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 SOAT1P35610 550 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 FEN1P39748 380 aaKnown RBP9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 GSK3BP49841 420 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 FOLH1Q04609 750 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 RGNQ15493 299 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 FXNQ16595 210 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 PRSS53Q2L4Q9 553 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 MTX3Q5HYI7 312 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 CDCP2Q5VXM1 449 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 CEACAM20Q6UY09 585 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 ZNF551Q7Z340 670 aaPredicted RBP9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 SLC30A8Q8IWU4 369 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 RNF148Q8N7C7 305 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 OR10A6Q8NH74 314 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 NEURL3Q96EH8 262 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 PEX11GQ96HA9 241 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 REXO5Q96IC2 774 aaKnown RBP9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 ZNF578Q96N58 590 aaPredicted RBP9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 LRFN5Q96NI6 719 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 CSF3RQ99062 836 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 YIPF2Q9BWQ6 316 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 ASPSCR1Q9BZE9 553 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 PRTFDC1Q9NRG1 225 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 FAM86C1Q9NVL1 165 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 ACTR3BQ9P1U1 418 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 HCN3Q9P1Z3 774 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 C5AR2Q9P296 337 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 PTGFRNQ9P2B2 879 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 ASCC3Q8N3C0 2202 aaKnown RBP9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 RNF103-CHMP3A0A140T963 221 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 EMC8O43402 210 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 CPNE3O75131 537 aaKnown RBP9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 FKBP6O75344 327 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 PRKRAO75569 313 aaKnown RBP9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 KLK3P07288 261 aaPredicted RBP9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 CYC1P08574 325 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 CD63P08962 238 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 TCN1P20061 433 aaPredicted RBP9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 XCR1P46094 333 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 DCDP81605 110 aaKnown RBP9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 OCA2Q04671 838 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 RBBP4Q09028 425 aa9.94□□□□□ -0.82
NEDD4L-224ENST00000588712 C16orf72Q14CZ0 275 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms