RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 ERGP11308 486 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 C6P13671 934 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 ADRB3P13945 408 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 TGM1P22735 817 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 TEAD1P28347 426 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 TIE1P35590 1138 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 RGS6P49758 472 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 ERVFC1P60507 584 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 ALDH6A1Q02252 535 aaKnown RBP13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 ILKQ13418 452 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 TMEM35AQ53FP2 167 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 DCST1Q5T197 706 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 PLAG1Q6DJT9 500 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 LAIR1Q6GTX8 287 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 FRMPD2BQ6IN97 320 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 CASP12Q6UXS9 341 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 CEACAM20Q6UY09 585 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 TMEM184AQ6ZMB5 413 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 ERN2Q76MJ5 926 aaKnown RBP13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 LRRTM4Q86VH4 590 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 FAM129CQ86XR2 697 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 KLHL6Q8WZ60 621 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 NECTIN4Q96NY8 510 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 NEURL2Q9BR09 285 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 HDAC8Q9BY41 377 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 ZDHHC5Q9C0B5 715 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 SLC6A16Q9GZN6 736 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 GPATCH2Q9NW75 528 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 TRNAU1APQ9NX07 287 aaKnown RBP13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 MS4A12Q9NXJ0 267 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 ZNF226Q9NYT6 803 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 TAS2R7Q9NYW3 318 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 EHD3Q9NZN3 535 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 SEC14L4Q9UDX3 406 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 WDR37Q9Y2I8 494 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 MRPS23Q9Y3D9 190 aaKnown RBP13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 PCDHGA3Q9Y5H0 932 aa13.36□□□□□ -0.27
NEDD4L-223ENST00000588516 A0A075B6Q4 140 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 PDZK1P1A8MUH7 402 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 TOR1BO14657 336 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 MAN1A2O60476 641 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 CYP17A1P05093 508 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 H1F0P07305 194 aaKnown RBP13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 GSTM3P21266 225 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 EPHA2P29317 976 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 IFNA8P32881 189 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 CSTF2P33240 577 aaKnown RBP eCLIP13.35□□□□□ -0.271e-12■■■■■ 170.7
NEDD4L-223ENST00000588516 IFNGR2P38484 337 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 LIPAP38571 399 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 ETV6P41212 452 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 C1DQ13901 141 aaKnown RBP13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 PTGES3Q15185 160 aaKnown RBP13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 SF1Q15637 639 aaKnown RBP13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 SPANXN2Q5MJ10 180 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 TMEM201Q5SNT2 666 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 TPRG1LQ5T0D9 272 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 PRAMEF8Q5VWM4 474 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 PRAMEF7Q5VXH5 474 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 PRR23CQ6ZRP0 262 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 TSEN54Q7Z6J9 526 aaKnown RBP13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 AQP11Q8NBQ7 271 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 ST13P5Q8NFI4 369 aaPredicted RBP13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 OR52J3Q8NH60 311 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 SORCS1Q8WY21 1168 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 TFGQ92734 400 aaPredicted RBP13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 CIDECQ96AQ7 238 aaPredicted RBP13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 EFHD2Q96C19 240 aaPredicted RBP13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 ZNF354BQ96LW1 612 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 MS4A8Q9BY19 250 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 PRRG3Q9BZD7 231 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 OR52A5Q9H2C5 316 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 TAAR2Q9P1P5 351 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 P2RX2Q9UBL9 471 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 KLHL3Q9UH77 587 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 NDOR1Q9UHB4 597 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 FBXL21Q9UKT6 434 aa13.35□□□□□ -0.27
NEDD4L-223ENST00000588516 KIF26AQ9ULI4 1882 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 ZNF292O60281 2723 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 NUP214P35658 2090 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 M0R082 166 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 TLR4O00206 839 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 KMOO15229 486 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 SH3BGRLO75368 114 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 CLEC3AO75596 197 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 SOD1P00441 154 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 OPN1SWP03999 348 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 STSP08842 583 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 ADORA3P0DMS8 318 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 CD72P21854 359 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 FSHRP23945 695 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 CHMP24386 653 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 GADD45AP24522 165 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 TPP2P29144 1249 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 EIF2DP41214 584 aaKnown RBP13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 SLC19A1P41440 591 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 FRKP42685 505 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 TMED10P49755 219 aaKnown RBP13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 REEP5Q00765 189 aa13.34□□□□□ -0.27
NEDD4L-223ENST00000588516 SYT16Q17RD7 645 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms