RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 MSH2P43246 934 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 KCNJ2P63252 427 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 RCN2Q14257 317 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 PDK4Q16654 411 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 DCST1Q5T197 706 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 C18orf63Q68DL7 685 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 BIVMQ86UB2 503 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 ANKMY2Q8IV38 441 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 LRRC8AQ8IWT6 810 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 SLC15A4Q8N697 577 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 ZNF441Q8N8Z8 693 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 BBOF1Q8ND07 529 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 GOT1L1Q8NHS2 421 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-225ENST00000586385 LINC01560Q8TB33 94 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 ARSGQ96EG1 525 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 FBXL20Q96IG2 436 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 VPS39Q96JC1 886 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 TIMP4Q99727 224 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 PRDM14Q9GZV8 571 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 UBQLN3Q9H347 655 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 RHOJQ9H4E5 214 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 CAB39LQ9H9S4 337 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 WWOXQ9NZC7 414 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 JKAMPQ9P055 326 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 COPS7AQ9UBW8 275 aa10.9□□□□□ -0.66
BRCA1-225ENST00000586385 BOKQ9UMX3 212 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-225ENST00000586385 MTO1Q9Y2Z2 717 aaKnown RBP10.9□□□□□ -0.66
BRCA1-225ENST00000586385 FBN3Q75N90 2809 aa10.9□□□□□ -0.67
BRCA1-225ENST00000586385 A0A1W2PS29 197 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 AHRRA9YTQ3 701 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 DVL2O14641 736 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 CLGNO14967 610 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 PHGDHO43175 533 aaKnown RBP10.89□□□□□ -0.67
BRCA1-225ENST00000586385 STK16O75716 305 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 TGFB1P01137 390 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 EPXP11678 715 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 CD1DP15813 335 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 CD53P19397 219 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 CPN2P22792 545 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 SOX18P35713 384 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 PEX19P40855 299 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 AGFG1P52594 562 aaKnown RBP10.89□□□□□ -0.67
BRCA1-225ENST00000586385 HNRNPH2P55795 449 aaKnown RBP10.89□□□□□ -0.67
BRCA1-225ENST00000586385 SLC37A1P57057 533 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 HERVK_113P63132 956 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 ERVK-8P63133 956 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 CHIT1Q13231 466 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 MORF4L2Q15014 288 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 EBPQ15125 230 aaKnown RBP10.89□□□□□ -0.67
BRCA1-225ENST00000586385 TBCCQ15814 346 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 NTRK2Q16620 822 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 TMEM198Q66K66 360 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 SULT1C3Q6IMI6 304 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 CHSY3Q70JA7 882 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 PRIMA1Q86XR5 153 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 LACC1Q8IV20 430 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 LAS2Q8IYD9 372 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 PDIK1LQ8N165 341 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 SNX31Q8N9S9 440 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 PDPRQ8NCN5 879 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 FAM13CQ8NE31 585 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 SLC22A8Q8TCC7 542 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 UCN3Q969E3 161 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 LRRC39Q96DD0 335 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 JSRP1Q96MG2 331 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-225ENST00000586385 DGAT2Q96PD7 388 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 NAP1L3Q99457 506 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-225ENST00000586385 EFCAB11Q9BUY7 163 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 ERVK-6Q9BXR3 956 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 CAPS2Q9BXY5 557 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 ZNF717Q9BY31 904 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-225ENST00000586385 WWTR1Q9GZV5 400 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 EPB41L4BQ9H329 900 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 OR51B5Q9H339 312 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 POPDC3Q9HBV1 291 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 CNIH4Q9P003 139 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 ZNF629Q9UEG4 869 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-225ENST00000586385 ERVK-19Q9WJR5 959 aa10.89□□□□□ -0.67
BRCA1-225ENST00000586385 MPDZO75970 2070 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 C15orf38-AP3S2A0A0A6YYH1 394 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 ANKRD33BA6NCL7 494 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 CXorf49A8MYA2 514 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-225ENST00000586385 ACSL3O95573 720 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 HRGP04196 525 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 CCDC166P0CW27 439 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 GDF1P27539 372 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 HPDP32754 393 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-225ENST00000586385 CDK9P50750 372 aaKnown RBP10.88□□□□□ -0.67
BRCA1-225ENST00000586385 FBXW4P57775 412 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 IRF8Q02556 426 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 PCDH1Q08174 1060 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 TGM3Q08188 693 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 SLAMF1Q13291 335 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 SPRED3Q2MJR0 410 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 TMEM35AQ53FP2 167 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 CDKL4Q5MAI5 379 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 DEPDC1Q5TB30 811 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 KHDRBS2Q5VWX1 349 aaKnown RBP10.88□□□□□ -0.67
BRCA1-225ENST00000586385 NSUN5P2Q63ZY6 315 aa10.88□□□□□ -0.67
BRCA1-225ENST00000586385 VASNQ6EMK4 673 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms