RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 GSTA2P09210 222 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 RHOXF2BP0C7M4 288 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 PCNAP12004 261 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 KLK2P20151 261 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 ZNF10P21506 573 aaPredicted RBP10.7□□□□□ -0.7
LIG3-207ENST00000586119 HIST1H1TP22492 207 aaPredicted RBP10.7□□□□□ -0.7
LIG3-207ENST00000586119 CPN2P22792 545 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 IRF8Q02556 426 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 DLG1Q12959 904 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 SLAMF1Q13291 335 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 SERTAD2Q14140 314 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 FRG1Q14331 258 aaKnown RBP10.7□□□□□ -0.7
LIG3-207ENST00000586119 PDK4Q16654 411 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 KRTAP21-3Q3LHN1 58 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 WLSQ5T9L3 541 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 SLC22A10Q63ZE4 541 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 TGIF2LYQ8IUE0 185 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 RELL1Q8IUW5 271 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 MMP21Q8N119 569 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 LRRN4CLQ8ND94 238 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 TNIP2Q8NFZ5 429 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 OR10G3Q8NGC4 313 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 OR5L2Q8NGL0 311 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 IFT81Q8WYA0 676 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 KIAA1191Q96A73 305 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 SARAFQ96BY9 339 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 SGCZQ96LD1 299 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 JSRP1Q96MG2 331 aaPredicted RBP10.7□□□□□ -0.7
LIG3-207ENST00000586119 FOXC2Q99958 501 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 RHOXF2Q9BQY4 288 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 CAPS2Q9BXY5 557 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 CXXC4Q9H2H0 198 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 EHD1Q9H4M9 534 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 CD274Q9NZQ7 290 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 ST6GALNAC2Q9UJ37 374 aa10.7□□□□□ -0.7
LIG3-207ENST00000586119 HRNRQ86YZ3 2850 aaPredicted RBP10.7□□□□□ -0.7
LIG3-207ENST00000586119 FAM221AA4D161 298 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 WDR1O75083 606 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 FAM155BO75949 473 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 CLPSP04118 112 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 GSTM2P28161 218 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 UQCRC1P31930 480 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 KIR2DL3P43628 341 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 STT3AP46977 705 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 AGFG1P52594 562 aaKnown RBP10.69□□□□□ -0.7
LIG3-207ENST00000586119 HNRNPH2P55795 449 aaKnown RBP10.69□□□□□ -0.7
LIG3-207ENST00000586119 HERVK_113P63132 956 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 ERVK-8P63133 956 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 IGLV3-21P80748 117 aaPredicted RBP10.69□□□□□ -0.7
LIG3-207ENST00000586119 FOLH1Q04609 750 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 FOXD4Q12950 439 aaPredicted RBP10.69□□□□□ -0.7
LIG3-207ENST00000586119 TRADDQ15628 312 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 MPEG1Q2M385 716 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 AP5B1Q2VPB7 878 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 BICRALQ6AI39 1079 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 SULT1C3Q6IMI6 304 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 POMZP3Q6PJE2 187 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 CDC20BQ86Y33 519 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 ULK2Q8IYT8 1036 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 ZBED8Q8IZ13 594 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 PAQR8Q8TEZ7 354 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 DGAT2Q96PD7 388 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 KCNC2Q96PR1 638 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 FMO2Q99518 471 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 TBCDQ9BTW9 1192 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 ERVK-6Q9BXR3 956 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 PITHD1Q9GZP4 211 aaPredicted RBP10.69□□□□□ -0.7
LIG3-207ENST00000586119 ZNF703Q9H7S9 590 aaPredicted RBP10.69□□□□□ -0.7
LIG3-207ENST00000586119 POPDC3Q9HBV1 291 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 PRM3Q9NNZ6 103 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 ZFP64Q9NPA5 681 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 RASSF1Q9NS23 344 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 CNOT11Q9UKZ1 510 aaKnown RBP10.69□□□□□ -0.7
LIG3-207ENST00000586119 ERVK-19Q9WJR5 959 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 VPS13CQ709C8 3753 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 DOCK7Q96N67 2140 aa10.69□□□□□ -0.7
LIG3-207ENST00000586119 LRRC14BA6NHZ5 514 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 GLOD5A6NK44 160 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 SYT5O00445 386 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 HCN1O60741 890 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 ACSL3O95573 720 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 CASP2P42575 452 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 SLC12A2P55011 1212 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 KCNJ2P63252 427 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 POU4F1Q01851 419 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 TGM3Q08188 693 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 DDX39BQ13838 428 aaKnown RBP10.68□□□□□ -0.7
LIG3-207ENST00000586119 ZNF267Q14586 743 aaPredicted RBP10.68□□□□□ -0.7
LIG3-207ENST00000586119 SLMAPQ14BN4 828 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 HIST2H2ACQ16777 129 aaPredicted RBP10.68□□□□□ -0.7
LIG3-207ENST00000586119 RIPPLY2Q5TAB7 128 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 DEPDC1Q5TB30 811 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 HIST2H2AA3Q6FI13 130 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 OR4C11Q6IEV9 310 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 CYS1Q717R9 158 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 ISCA2Q86U28 154 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 LAS2Q8IYD9 372 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 TCAIMQ8N3R3 496 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 PDPRQ8NCN5 879 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 FAM13CQ8NE31 585 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms