RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 KRT73Q86Y46 540 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 FAM20CQ8IXL6 584 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 HORMAD2Q8N7B1 307 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 AMER3Q8N944 861 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 ATG16L2Q8NAA4 619 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 FLCNQ8NFG4 579 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 OR8K5Q8NH50 307 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 FLVCR1-AS1Q8TAF5 88 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 BBS10Q8TAM1 723 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 ZNF566Q969W8 418 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 TM4SF19Q96DZ7 209 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 KLHDC7BQ96G42 594 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 CNDP2Q96KP4 475 aaKnown RBP10.66□□□□□ -0.7
LIG3-204ENST00000585740 OR2A14Q96R47 310 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 SERINC2Q96SA4 455 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 TUBA1CQ9BQE3 449 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 PSD2Q9BQI7 771 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 SPATA5L1Q9BVQ7 753 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 ABCG4Q9H172 646 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 PCED1AQ9H1Q7 454 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 SOX17Q9H6I2 414 aaPredicted RBP10.66□□□□□ -0.7
LIG3-204ENST00000585740 C3orf14Q9HBI5 128 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 EXD2Q9NVH0 621 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 MS4A12Q9NXJ0 267 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 PTTG2Q9NZH5 202 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 NDUFAF4Q9P032 175 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 CPNE7Q9UBL6 633 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 RAB23Q9ULC3 237 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 ZNF780BQ9Y6R6 833 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 ENPP4Q9Y6X5 453 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 MYO15AQ9UKN7 3530 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 SPTBN4Q9H254 2564 aa10.66□□□□□ -0.7
LIG3-204ENST00000585740 A0A0J9YY10 115 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 SPTY2D1-AS1A0A0U1RR47 76 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 A0A1B0GTW7 788 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 A0A1W2PPC4 97 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 A0A1W2PR48 441 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 GSAPA4D1B5 854 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 EME2A4GXA9 379 aaPredicted RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 OR6C74A6NCV1 312 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 ARRDC5A6NEK1 342 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 TMEM229AB2RXF0 380 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 EMC8O43402 210 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 PROM1O43490 865 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 MRPS14O60783 128 aaKnown RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 DIRAS1O95057 198 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 AIFM1O95831 613 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 IFNW1P05000 195 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 FHP07954 510 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 TFPTP0C1Z6 253 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 CCDC159P0C7I6 412 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 THEGLP0DJG4 465 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 SMIM10L1P0DMW3 83 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 NR2F6P10588 404 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 JUNBP17275 347 aaPredicted RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 POLR2CP19387 275 aaPredicted RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 MATN1P21941 496 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 CERS1P27544 350 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 MPIP34949 423 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 NUP107P57740 925 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 CXCR4P61073 352 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 BTN3A2P78410 334 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 PRR5P85299 388 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 SPIBQ01892 262 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 PPP1R8Q12972 351 aaKnown RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 EIF2B5Q13144 721 aaKnown RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 TP53BP2Q13625 1128 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 GPR18Q14330 331 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 CEBPEQ15744 281 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 FBXO42Q6P3S6 717 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 TNFAIP8L2Q6P589 184 aaPredicted RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 B3GNT6Q6ZMB0 384 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 ABHD13Q7L211 337 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 VN1R4Q7Z5H5 301 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 TAF8Q7Z7C8 310 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 CYP4Z1Q86W10 505 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 OOSP2Q86WS3 158 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 TTC29Q8NA56 475 aaPredicted RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 CHDHQ8NE62 594 aaPredicted RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 UTP15Q8TED0 518 aaKnown RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 FBLIM1Q8WUP2 373 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 ZFAND2BQ8WV99 257 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 JPH3Q8WXH2 748 aaPredicted RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 PROX1Q92786 737 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 RERGQ96A58 199 aaPredicted RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 SMIM10Q96HG1 83 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 TMEM19Q96HH6 336 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 MAGED4Q96JG8 741 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 PITX2Q99697 317 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 PIP5K1AQ99755 562 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 GPR174Q9BXC1 333 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 GABARAPL3Q9BY60 117 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 IRF2BPLQ9H1B7 796 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 RIBC2Q9H4K1 309 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 LMAN1LQ9HAT1 526 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 ZCCHC3Q9NUD5 404 aaKnown RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 RSL24D1Q9UHA3 163 aaKnown RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 FBXW2Q9UKT8 454 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 CES1P1Q9UKY3 287 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 DUSP12Q9UNI6 340 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms