RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CYS1Q717R9 158 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 WDR53Q7Z5U6 358 aaPredicted RBP13.31□□□□□ -0.28
SDF2-202ENST00000585428 CREG2Q8IUH2 290 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 DND1Q8IYX4 353 aaKnown RBP13.31□□□□□ -0.28
SDF2-202ENST00000585428 FBXW8Q8N3Y1 598 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 OR7G3Q8NG95 312 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 FBXL20Q96IG2 436 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 DGAT2Q96PD7 388 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 SH3GL2Q99962 352 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 PHACTR1Q9C0D0 580 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 CLEC4MQ9H2X3 399 aaPredicted RBP13.31□□□□□ -0.28
SDF2-202ENST00000585428 EXO5Q9H790 373 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 RPF2Q9H7B2 306 aaKnown RBP13.31□□□□□ -0.28
SDF2-202ENST00000585428 MS4A12Q9NXJ0 267 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 RPH3AQ9Y2J0 694 aaPredicted RBP13.31□□□□□ -0.28
SDF2-202ENST00000585428 SPACA6W5XKT8 324 aa13.31□□□□□ -0.28
SDF2-202ENST00000585428 ANKRD33BA6NCL7 494 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 CCNT2O60583 730 aaKnown RBP13.3□□□□□ -0.28
SDF2-202ENST00000585428 FOSL1P15407 271 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 TCP1P17987 556 aaKnown RBP13.3□□□□□ -0.28
SDF2-202ENST00000585428 SERPINB3P29508 390 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 TIMP3P35625 211 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 KHDRBS2Q5VWX1 349 aaKnown RBP13.3□□□□□ -0.28
SDF2-202ENST00000585428 MED27Q6P2C8 311 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 ISCA2Q86U28 154 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 GPR180Q86V85 440 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 CDC20BQ86Y33 519 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 KLHL7Q8IXQ5 586 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 RELL2Q8NC24 303 aaPredicted RBP13.3□□□□□ -0.28
SDF2-202ENST00000585428 NAXEQ8NCW5 288 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 TNIP2Q8NFZ5 429 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 SLC22A8Q8TCC7 542 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 FAM222BQ8WU58 562 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 UBE2E3Q969T4 207 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 MBD6Q96DN6 1003 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 CMTM7Q96FZ5 175 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 TIMP4Q99727 224 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 CD274Q9NZQ7 290 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 ZNF629Q9UEG4 869 aaPredicted RBP13.3□□□□□ -0.28
SDF2-202ENST00000585428 CNOT11Q9UKZ1 510 aaKnown RBP13.3□□□□□ -0.28
SDF2-202ENST00000585428 BOKQ9UMX3 212 aaPredicted RBP13.3□□□□□ -0.28
SDF2-202ENST00000585428 EDARQ9UNE0 448 aa13.3□□□□□ -0.28
SDF2-202ENST00000585428 A6NNC1 897 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 WASHC1A8K0Z3 465 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 SAP18O00422 153 aaKnown RBP13.29□□□□□ -0.28
SDF2-202ENST00000585428 PHGDHO43175 533 aaKnown RBP13.29□□□□□ -0.28
SDF2-202ENST00000585428 SH3BGRLO75368 114 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 TRIM3O75382 744 aaPredicted RBP13.29□□□□□ -0.28
SDF2-202ENST00000585428 ALOX15P16050 662 aaPredicted RBP13.29□□□□□ -0.28
SDF2-202ENST00000585428 DNASE1P24855 282 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 UQCRC1P31930 480 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 SLC37A1P57057 533 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 KCNJ2P63252 427 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 ADAM8P78325 824 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 CEBPEQ15744 281 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 ZKSCAN8Q15776 578 aaPredicted RBP13.29□□□□□ -0.28
SDF2-202ENST00000585428 NTRK2Q16620 822 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 PRAMEF20Q5VT98 475 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 C18orf63Q68DL7 685 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 ST13P4Q8IZP2 240 aaPredicted RBP13.29□□□□□ -0.28
SDF2-202ENST00000585428 OR10G3Q8NGC4 313 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 RGMAQ96B86 450 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 NTNG2Q96CW9 530 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 TSPAN17Q96FV3 270 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 RMND5BQ96G75 393 aaPredicted RBP13.29□□□□□ -0.28
SDF2-202ENST00000585428 ART5Q96L15 291 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 ALPK1Q96QP1 1244 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 KRT12Q99456 494 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 GPR22Q99680 433 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 SORBS1Q9BX66 1292 aaKnown RBP13.29□□□□□ -0.28
SDF2-202ENST00000585428 SLC6A15Q9H2J7 730 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 OR51B5Q9H339 312 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 GSX1Q9H4S2 264 aaPredicted RBP13.29□□□□□ -0.28
SDF2-202ENST00000585428 TRMT1Q9NXH9 659 aaKnown RBP13.29□□□□□ -0.28
SDF2-202ENST00000585428 ADGRE2Q9UHX3 823 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 TSC22D4Q9Y3Q8 395 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 IKBKGQ9Y6K9 419 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 DNAJC13O75165 2243 aa13.29□□□□□ -0.28
SDF2-202ENST00000585428 IQANK1A0A1B0GTG1 560 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 KDM4EB2RXH2 506 aaPredicted RBP13.28□□□□□ -0.28
SDF2-202ENST00000585428 DYRK3O43781 588 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 FAM155BO75949 473 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 GPR75O95800 540 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 CLPSP04118 112 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 STMN1P16949 149 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 SERPINB1P30740 379 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 SSTR1P30872 391 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 GALNSP34059 522 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 SSR2P43308 183 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 TRPC1P48995 793 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 ARFIP1P53367 373 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 PPP2R2AP63151 447 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 CRYZQ08257 329 aaKnown RBP13.28□□□□□ -0.28
SDF2-202ENST00000585428 FOXD4Q12950 439 aaPredicted RBP13.28□□□□□ -0.28
SDF2-202ENST00000585428 DUSP8Q13202 625 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 SPRED3Q2MJR0 410 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 FLYWCH1Q4VC44 716 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 LRRC70Q7Z2Q7 622 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 MAATS1Q7Z4T9 603 aa13.28□□□□□ -0.28
SDF2-202ENST00000585428 CAMKMTQ7Z624 323 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms