RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 POP7O75817 140 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PDE9AO76083 593 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SEMA3DO95025 777 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NR4A2P43354 598 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 MAPK12P53778 367 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NFE2L1Q14494 772 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ZNF77Q15935 545 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PDE4DIPQ5VU43 2346 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PGBD2Q6P3X8 592 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 WDR53Q7Z5U6 358 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TRIM69Q86WT6 500 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NANOGP1Q8N7R0 232 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 RAB8BQ92930 207 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TM4SF18Q96CE8 201 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ZNF486Q96H40 463 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ZNF514Q96K75 400 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ZNF354BQ96LW1 612 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 IL17FQ96PD4 163 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ABCG4Q9H172 646 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 POLR2J3Q9H1A7 115 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NDUFB11Q9NX14 153 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 MARK1Q9P0L2 795 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 WNT6Q9Y6F9 365 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 LAMA3Q16787 3333 aa13.48□□□□□ -0.25
CDK5RAP3-237ENST00000585163 LRRK1Q38SD2 2015 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 LTBP2Q14767 1821 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ZNF670-ZNF695F2Z2N8 137 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 HMGN4O00479 90 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PDPK1O15530 556 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 B4GALT2O60909 372 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CCNKO75909 580 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PAPLNO95428 1278 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CXCL14O95715 111 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 MYCP01106 439 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 HBQ1P09105 142 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 BMPR1AP36894 532 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 KCNJ5P48544 419 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 RORCP51449 518 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 METAP1P53582 386 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 EPHA5P54756 1037 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 IFITM2Q01629 132 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ZNF91Q05481 1191 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 KHDRBS2Q5VWX1 349 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SLC39A5Q6ZMH5 540 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 C6orf120Q7Z4R8 191 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 RBM45Q8IUH3 476 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PROKR2Q8NFJ6 384 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 OR2L2Q8NH16 312 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TEFMQ96QE5 360 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 FUZQ9BT04 418 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 RHBGQ9H310 441 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 STUB1Q9UNE7 303 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 V9GYH0 126 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 RTCAO00442 366 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 RGS5O15539 181 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 UGT2B17O75795 530 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 DDX5P17844 614 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ITGB7P26010 798 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 BSGP35613 385 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 GPR1P46091 355 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 HTR3AP46098 478 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PCBP4P57723 403 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 OR2B6P58173 313 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 HEPACAMQ14CZ8 416 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 OCLNQ16625 522 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TRIM60Q495X7 471 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 RAET1GQ6H3X3 334 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 DEF8Q6ZN54 512 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SLC7A5P1Q8MH63 180 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 OR8H2Q8N162 312 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 PIAS4Q8N2W9 510 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 C2orf73Q8N5S3 287 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 OR4D11Q8NGI4 311 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SLC7A13Q8TCU3 470 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ASB15Q8WXK1 588 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 RAD51AP1Q96B01 352 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NUS1Q96E22 293 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TRMT61AQ96FX7 289 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 DEFB118Q96PH6 123 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 WFDC6Q9BQY6 131 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ACAT2Q9BWD1 397 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 POLR2J2Q9GZM3 115 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NEK6Q9HC98 313 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SEMA3GQ9NS98 782 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SIRT3Q9NTG7 399 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 GPR34Q9UPC5 381 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ASF1AQ9Y294 204 aa13.47□□□□□ -0.25
CDK5RAP3-237ENST00000585163 HYKKA2RU49 373 aa13.46□□□□□ -0.25
CDK5RAP3-237ENST00000585163 SLC35F4A4IF30 521 aa13.46□□□□□ -0.25
CDK5RAP3-237ENST00000585163 HEPACAM2A8MVW5 462 aa13.46□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TPST2O60704 377 aa13.46□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TP53P04637 393 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-237ENST00000585163 FRKP42685 505 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-237ENST00000585163 WDR5P61964 334 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-237ENST00000585163 CNTN1Q12860 1018 aa13.46□□□□□ -0.25
CDK5RAP3-237ENST00000585163 MLLT11Q13015 90 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-237ENST00000585163 ZNF765Q7L2R6 523 aa13.46□□□□□ -0.25
CDK5RAP3-237ENST00000585163 NRARPQ7Z6K4 114 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms