RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 TMBIM6P55061 237 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 MCCD1P59942 119 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 LIPJQ5W064 366 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 LRFN4Q6PJG9 635 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 CCDC28AQ8IWP9 274 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 SCAMP4Q969E2 229 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 TLR9Q9NR96 1032 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 AFDNP55196 1824 aaKnown RBP12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 H0YAE9 185 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 LEFTY1O75610 366 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 ATG9BQ674R7 924 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 ZDHHC14Q8IZN3 488 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 KLHDC7BQ96G42 594 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 SEZ6LQ9BYH1 1024 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 CD93Q9NPY3 652 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 TMEM59LQ9UK28 342 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 C2orf74A8MZ97 194 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 MSL3P1P0C860 447 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 HSD11B2P80365 405 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 GPR17Q13304 367 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 MTMR14Q8NCE2 650 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 RDH12Q96NR8 316 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 RAD9AQ99638 391 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 PTGDR2Q9Y5Y4 395 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 TVP23AA6NH52 213 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 PCDH17O14917 1159 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 RASAL1O95294 804 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 KCNE1P15382 129 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 PYCR1P32322 319 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 HNF1BP35680 557 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 TRAM1Q15629 374 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 TMEM107Q6UX40 140 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 OR13C3Q8NGS6 347 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 OR1F2PQ96R84 312 aa12.72□□□□□ -0.37
RAB11FIP4-210ENST00000585058 OTOL1A6NHN0 477 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 ZNF850A8MQ14 1090 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 SNAPC5O75971 98 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 H2AFB2P0C5Z0 115 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 JMJD7P0C870 316 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 ASPGQ86U10 573 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 SHDQ96IW2 340 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 MYNNQ9NPC7 610 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 FAM221BA6H8Z2 402 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 HRGP04196 525 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 ADORA3P0DMS8 318 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 PRKCAP17252 672 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 DPP6P42658 865 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 GCGRP47871 477 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 GALK2Q01415 458 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 SLAMF1Q13291 335 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 MRPL49Q13405 166 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 CTC1Q2NKJ3 1217 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 C6orf141Q5SZD1 244 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 GARNL3Q5VVW2 1013 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 SLC16A9Q7RTY1 509 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 KLBQ86Z14 1044 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 DOK4Q8TEW6 326 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 CCDC106Q9BWC9 280 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 RANBP3Q9H6Z4 567 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 ACSL5Q9ULC5 683 aa12.71□□□□□ -0.37
RAB11FIP4-210ENST00000585058 FAM163BP0C2L3 166 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 C1GALT1C1LP0DN25 315 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 CD1DP15813 335 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 ACTC1P68032 377 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 ACTA1P68133 377 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 ZNF33AQ06730 810 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 CLCA4Q14CN2 919 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 UBE2UQ5VVX9 321 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 DLK2Q6UY11 383 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 ASCC1Q8N9N2 400 aaKnown RBP12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 SCRN2Q96FV2 425 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 PGAM5Q96HS1 289 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 C12orf42Q96LP6 360 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 FCRL3Q96P31 734 aaPredicted RBP12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 DPH2Q9BQC3 489 aaPredicted RBP12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 PARP4Q9UKK3 1724 aaKnown RBP12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 TRBV2A0A0J9YWF9 115 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 PAK4O96013 591 aaPredicted RBP12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 DNASE1P24855 282 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 RPS26P62854 115 aaKnown RBP12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 COL9A2Q14055 689 aaPredicted RBP12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 ZNF181Q2M3W8 571 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 TREML1Q86YW5 311 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 HS3ST5Q8IZT8 346 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 ARL6Q9H0F7 186 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 NID2Q14112 1375 aa12.71□□□□□ -0.38
RAB11FIP4-210ENST00000585058 A0A1B0GV50 99 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 KIAA0513O60268 411 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 FAM189A1O60320 539 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 HSD3B1P14060 373 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 PLCXD2Q0VAA5 305 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 TCEAL4Q96EI5 215 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 OARD1Q9Y530 152 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 PCDHGA2Q9Y5H1 932 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 SDHDO14521 159 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 FGF18O76093 207 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 MT-ND2P03891 347 aa12.7□□□□□ -0.38
RAB11FIP4-210ENST00000585058 HTR2AP28223 471 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms