RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 CCDC154A6NI56 674 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 NUDT19A8MXV4 375 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 E7ENX8 843 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 E7EQ34 232 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 H0YIV9 168 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 MRASO14807 208 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 LSM1O15116 133 aaKnown RBP9.71□□□□□ -0.86
SS18-221ENST00000582448 CFLARO15519 480 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 MGRN1O60291 552 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 RASSF9O75901 435 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 PDYNP01213 254 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 ALDOCP09972 364 aaKnown RBP9.71□□□□□ -0.86
SS18-221ENST00000582448 PRPS2P11908 318 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 ZNF28P17035 718 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 ITGAXP20702 1163 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 GPX3P22352 226 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 STAT5AP42229 794 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 CASP2P42575 452 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 SEPHS1P49903 392 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 HTR6P50406 440 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 RAP1GDS1P52306 607 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 NME5P56597 212 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 RPL38P63173 70 aaKnown RBP9.71□□□□□ -0.86
SS18-221ENST00000582448 TAP2Q03519 686 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 TBL3Q12788 808 aaKnown RBP9.71□□□□□ -0.86
SS18-221ENST00000582448 PRKG2Q13237 762 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 DOC2AQ14183 400 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 SNCBQ16143 134 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 TRMT5Q32P41 509 aaKnown RBP9.71□□□□□ -0.86
SS18-221ENST00000582448 KRTAP19-4Q3LI73 84 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 FBLN7Q53RD9 439 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 COQ5Q5HYK3 327 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 C1orf146Q5VVC0 180 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 IL23RQ5VWK5 629 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 CAPRIN2Q6IMN6 1127 aaKnown RBP9.71□□□□□ -0.86
SS18-221ENST00000582448 MED27Q6P2C8 311 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 PRMT9Q6P2P2 845 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 WDR74Q6RFH5 385 aaPredicted RBP9.71□□□□□ -0.86
SS18-221ENST00000582448 LCTLQ6UWM7 567 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 C6orf15Q6UXA7 325 aaPredicted RBP9.71□□□□□ -0.86
SS18-221ENST00000582448 NET1Q7Z628 596 aaPredicted RBP9.71□□□□□ -0.86
SS18-221ENST00000582448 TMPRSS11BQ86T26 416 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 C17orf64Q86WR6 236 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 ULK2Q8IYT8 1036 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 DSELQ8IZU8 1212 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 PGAM4Q8N0Y7 254 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 KRT78Q8N1N4 520 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 SFRP1Q8N474 314 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 GLB1L3Q8NCI6 653 aaPredicted RBP9.71□□□□□ -0.86
SS18-221ENST00000582448 PPFIBP2Q8ND30 876 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 OR2T11Q8NH01 316 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 SSC4DQ8WTU2 575 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 SLC5A11Q8WWX8 675 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 ROPN1LQ96C74 230 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 CMTM7Q96FZ5 175 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 C1orf50Q9BV19 199 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 BRINP2Q9C0B6 783 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 TWSG1Q9GZX9 223 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 WDR41Q9HAD4 459 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 INTS7Q9NVH2 962 aaKnown RBP9.71□□□□□ -0.86
SS18-221ENST00000582448 PDP2Q9P2J9 529 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 BAIAP2L1Q9UHR4 511 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 GPR45Q9Y5Y3 372 aa9.71□□□□□ -0.86
SS18-221ENST00000582448 SMAD7O15105 426 aaKnown RBP9.7□□□□□ -0.86
SS18-221ENST00000582448 NRP2O60462 931 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 DNAJB5O75953 348 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 CCNDBP1O95273 360 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 C1GALT1C1LP0DN25 315 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 PCNAP12004 261 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 TYRP1P17643 537 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 EPORP19235 508 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 SERPINB1P30740 379 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 CPOXP36551 454 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 FASLGP48023 281 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 POLR2JP52435 117 aaKnown RBP9.7□□□□□ -0.86
SS18-221ENST00000582448 DIO3P55073 304 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 SSPNQ14714 243 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.7□□□□□ -0.86
SS18-221ENST00000582448 ATG9BQ674R7 924 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 REP15Q6BDI9 236 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 CYP20A1Q6UW02 462 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 Q6ZSR9 355 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 SLC9B2Q86UD5 537 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 TBC1D19Q8N5T2 526 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 CXorf40BQ96DE9 158 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 RCC1LQ96I51 464 aaKnown RBP9.7□□□□□ -0.86
SS18-221ENST00000582448 METTL2AQ96IZ6 378 aaKnown RBP9.7□□□□□ -0.86
SS18-221ENST00000582448 HBEGFQ99075 208 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 BRF2Q9HAW0 419 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 SIRT5Q9NXA8 310 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 ASIC5Q9NY37 505 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 TBC1D29Q9UFV1 150 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 GIMAP2Q9UG22 337 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 LEF1Q9UJU2 399 aaPredicted RBP9.7□□□□□ -0.86
SS18-221ENST00000582448 MAPRE3Q9UPY8 281 aa9.7□□□□□ -0.86
SS18-221ENST00000582448 POLR3HQ9Y535 204 aaPredicted RBP9.7□□□□□ -0.86
SS18-221ENST00000582448 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.7□□□□□ -0.86
SS18-221ENST00000582448 KCNE1BA0A087WTH5 132 aa9.69□□□□□ -0.86
SS18-221ENST00000582448 A0A1W2PP18 115 aa9.69□□□□□ -0.86
SS18-221ENST00000582448 ANKRD34BA5PLL1 514 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms