RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 C14orf28Q4W4Y0 310 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 WDR25Q64LD2 544 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 ABRAXAS1Q6UWZ7 409 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 MSANTD1Q6ZTZ1 278 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 CYP4V2Q6ZWL3 525 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 ICA1LQ8NDH6 482 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 CHDHQ8NE62 594 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 ZNF671Q8TAW3 534 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 TBCKQ8TEA7 893 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 PRCCQ92733 491 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 RAB3CQ96E17 227 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 CCDC114Q96M63 670 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 ZNF285Q96NJ3 590 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 CXXC4Q9H2H0 198 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 DPEP3Q9H4B8 488 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 IL1RL2Q9HB29 575 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 PDFQ9HBH1 243 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 ZNF275Q9NSD4 429 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 ABCC13Q9NSE7 274 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 TAS2R16Q9NYV7 291 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 IL17CQ9P0M4 197 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 SEPT10Q9P0V9 454 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 EIF3KQ9UBQ5 218 aaKnown RBP2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 ACEP12821 1306 aa2.31□□□□□ -2.04
SMCHD1-206ENST00000581631 OOEPA6NGQ2 149 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 RNF212BA8MTL3 300 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 ATP9AO75110 1047 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 GLCEO94923 617 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 GH1P01241 217 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 GSTA2P09210 222 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 SCG2P13521 617 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 P4HA1P13674 534 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 CALML3P27482 149 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 PPP2R1BP30154 601 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 FRKP42685 505 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 CCR4P51679 360 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 SLC34A1Q06495 639 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 ARHGAP1Q07960 439 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 GSG1Q2KHT4 349 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 WSCD2Q2TBF2 565 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 ANKRD55Q3KP44 614 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 UNC50Q53HI1 259 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 ODF2Q5BJF6 829 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 NHSL2Q5HYW2 709 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 LRRC38Q5VT99 294 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 TUSC5Q8IXB3 177 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 KLHDC8AQ8IYD2 350 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 PRR22Q8IZ63 422 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 THEM5Q8N1Q8 247 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 GVQW1Q8N7I0 195 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 ATAD1Q8NBU5 361 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 TRPV3Q8NET8 790 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 OR4F5Q8NH21 305 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 ULK4Q96C45 1275 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 PHYHIPLQ96FC7 376 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 CDKN2AIPNLQ96HQ2 116 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 ZMAT2Q96NC0 199 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 SIGLEC12Q96PQ1 595 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 SSX3Q99909 188 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 ACPTQ9BZG2 426 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 WWP1Q9H0M0 922 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 TNMDQ9H2S6 317 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 ELL3Q9HB65 397 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 AMBNQ9NP70 447 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 TMEM161AQ9NX61 479 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 VPS18Q9P253 973 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 DNAJB9Q9UBS3 223 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 FBXL5Q9UKA1 691 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 CDH7Q9ULB5 785 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 CLEC4EQ9ULY5 219 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 FAM205AQ6ZU69 1335 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 KIAA1217Q5T5P2 1943 aa2.3□□□□□ -2.04
SMCHD1-206ENST00000581631 SH3PXD2BA1X283 911 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 SDR42E2A6NKP2 422 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 CCT8L1PA6NM43 557 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 E7ENQ6 273 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 SLC16A8O95907 504 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 C8orf89P0DMQ9 161 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 ATP6V1B1P15313 513 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 GDF1P27539 372 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 MDH2P40926 338 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 RBP5P82980 135 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 MEF2DQ14814 521 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 P2RY14Q15391 338 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 PPP1R3AQ16821 1122 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 CCDC158Q5M9N0 1113 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 NHLRC1Q6VVB1 395 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 Q6ZRG5 221 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 OTOAQ7RTW8 1153 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 ASPGQ86U10 573 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 VASH2Q86V25 355 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 HOOK3Q86VS8 718 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 C17orf64Q86WR6 236 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 FBXW8Q8N3Y1 598 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 ZNF525Q8N782 197 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 GGHQ92820 318 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 PNPLA2Q96AD5 504 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 NUS1Q96E22 293 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 AGPAT1Q99943 283 aa2.29□□□□□ -2.04
SMCHD1-206ENST00000581631 MAPKAP1Q9BPZ7 522 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms