RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 GSTO1P78417 241 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 VWA2Q5GFL6 755 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 DCAF12Q5T6F0 453 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 C1orf189Q5VU69 101 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 LIPJQ5W064 366 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 REP15Q6BDI9 236 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 IQCA1Q86XH1 822 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 NAT8LQ8N9F0 302 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 OR1K1Q8NGR3 316 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 ZPLD1Q8TCW7 415 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 AGAP11Q8TF27 550 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 CFAP36Q96G28 342 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 CXorf58Q96LI9 332 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 GDF3Q9NR23 364 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 PNPLA3Q9NST1 481 aa3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 FAM120CQ9NX05 1096 aaKnown RBP3.52□□□□□ -1.85
SMCHD1-204ENST00000581226 IGLV3-10A0A075B6K4 115 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 SH3PXD2BA1X283 911 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 PHOX2AO14813 284 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 FMO6PO60774 539 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 VENTXO95231 258 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 TPBGLP0DKB5 382 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 CT45A8P0DMV1 189 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 CT45A9P0DMV2 189 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 FOSL2P15408 326 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 CYP3A5P20815 502 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 KRTAP10-3P60369 221 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 EMC2Q15006 297 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 P2RY14Q15391 338 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 TRADDQ15628 312 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 SGCBQ16585 318 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 STX1AQ16623 288 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 PCK2Q16822 640 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 ZNF674Q2M3X9 581 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 AARDQ4LEZ3 155 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 CT45A2Q5DJT8 189 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 Q6ZRG5 221 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 PRSS42Q7Z5A4 293 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 CCDC91Q7Z6B0 441 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 ADCK1Q86TW2 530 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 BEST4Q8NFU0 473 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 OR4L1Q8NH43 312 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 DPEP3Q9H4B8 488 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 CLEC5AQ9NY25 188 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 TECRQ9NZ01 308 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 EIF3KQ9UBQ5 218 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 ZNF107Q9UII5 783 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 MRTO4Q9UKD2 239 aaKnown RBP3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 FBXW2Q9UKT8 454 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 TP53TG3Q9ULZ0 132 aa3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 FOXA2Q9Y261 457 aaPredicted RBP3.51□□□□□ -1.85
SMCHD1-204ENST00000581226 FOXI3A8MTJ6 420 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 RNF212BA8MTL3 300 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 AKAP3O75969 853 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 BRCC3P46736 316 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 RPL34P49207 117 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 HSPA14Q0VDF9 509 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 MORF4L2Q15014 288 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 SLC39A12Q504Y0 691 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 RNLSQ5VYX0 342 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 RFWD3Q6PCD5 774 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 VITQ6UXI7 678 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 ITIH5Q86UX2 942 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 GPD1LQ8N335 351 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 FBXW8Q8N3Y1 598 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 C10orf53Q8N6V4 93 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 SIDT2Q8NBJ9 832 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 CHDHQ8NE62 594 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 LPCAT1Q8NF37 534 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 OR6T1Q8NGN1 323 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 PTP4A1Q93096 173 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 RBM18Q96H35 190 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 SPAG8Q99932 426 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 APOL2Q9BQE5 337 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 SLC26A1Q9H2B4 701 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 ELL3Q9HB65 397 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 DDX28Q9NUL7 540 aaKnown RBP3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 PRR34Q9NV39 138 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 DHRS4-AS1Q9P1J3 65 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 MAD2L2Q9UI95 211 aa3.5□□□□□ -1.85
SMCHD1-204ENST00000581226 TP53BP1Q12888 1972 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 A0A1W2PRV1 198 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 YJEFN3A6XGL0 299 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 TXNDC12O95881 172 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 PDGFBP01127 241 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 MBL2P11226 248 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 HSD17B1P14061 328 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 CALML3P27482 149 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 PPP2R1BP30154 601 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 KIAA1024LP59773 190 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 TEFQ10587 303 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 CRMP1Q14194 572 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 GK2Q14410 553 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 DDI2Q5TDH0 399 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 STHQ8IWL8 128 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 PARP8Q8N3A8 854 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 FBXL16Q8N461 479 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 OR6M1Q8NGM8 313 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 OR4F5Q8NH21 305 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 FBXO25Q8TCJ0 367 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms