RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 TMEM108Q6UXF1 575 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 LINC00114Q6XXX2 140 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 C1orf229Q6ZS94 237 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 Q6ZTK2 550 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 RFX8Q6ZV50 586 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 C22orf34Q6ZV56 151 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 RNF144BQ7Z419 303 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 ADCK2Q7Z695 626 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 LDB1Q86U70 411 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 IFNEQ86WN2 208 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 LRRC49Q8IUZ0 686 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 ARHGEF19Q8IW93 802 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 DCUN1D3Q8IWE4 304 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 ZNF619Q8N2I2 560 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 TMEM132CQ8N3T6 1108 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 SVOPQ8N4V2 548 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 C2orf73Q8N5S3 287 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 LILRA3Q8N6C8 439 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 NPWQ8N729 165 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 GPATCH11Q8N954 259 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 APCDD1LQ8NCL9 501 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 FBXO15Q8NCQ5 510 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 NFAM1Q8NET5 270 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 OR2L3Q8NG85 312 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 OR14L1PQ8NHC6 308 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 GSDMBQ8TAX9 411 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 FBXO30Q8TB52 745 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 PIWIL2Q8TC59 973 aaKnown RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 ZNF398Q8TD17 642 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 WDR60Q8WVS4 1066 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 CENPIQ92674 756 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 NCLNQ969V3 563 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 S100PBPQ96BU1 408 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 PEX11GQ96HA9 241 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 CCDC34Q96HJ3 373 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 DNAJC1Q96KC8 554 aaKnown RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 ZSCAN31Q96LW9 406 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 TIGD1Q96MW7 591 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 CLIC6Q96NY7 704 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 SORCS2Q96PQ0 1159 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 PANX2Q96RD6 677 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 COPS8Q99627 209 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 EBNA1BP2Q99848 306 aaKnown RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 DPH7Q9BTV6 452 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 MAGEB5Q9BZ81 275 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 STMN4Q9H169 189 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 DHX35Q9H5Z1 703 aaKnown RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 DENND2DQ9H6A0 471 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 ZWILCHQ9H900 591 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 FKRPQ9H9S5 495 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 UGT1A10Q9HAW8 530 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 MRPS30Q9NP92 439 aaKnown RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 UBE2TQ9NPD8 197 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 EIF2B3Q9NR50 452 aaKnown RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 PNO1Q9NRX1 252 aaKnown RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 LANCL2Q9NS86 450 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 HACD3Q9P035 362 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 COPS7AQ9UBW8 275 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 PCYOX1Q9UHG3 505 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 CORO1CQ9ULV4 474 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 ZNF232Q9UNY5 417 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.1□□□□□ -2.07
CTC1-207ENST00000580299 C15orf41Q9Y2V0 281 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 IKBKGQ9Y6K9 419 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 CLCA3PQ9Y6N3 262 aa2.1□□□□□ -2.07
CTC1-207ENST00000580299 UBR4Q5T4S7 5183 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 PCNX3Q9H6A9 2034 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.09□□□□□ -2.07
CTC1-207ENST00000580299 ELOA3CA0A087WX78 387 aaPredicted RBP2.09□□□□□ -2.07
CTC1-207ENST00000580299 TCRBV16S1A1N1A0A5B0 115 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 ANKRD33BA6NCL7 494 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 DPRXA6NFQ7 191 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 C2CD4BA6NLJ0 364 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 E7EQL1 145 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 PMM2O15305 246 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 STX7O15400 261 aaKnown RBP2.09□□□□□ -2.07
CTC1-207ENST00000580299 MAFKO60675 156 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 SASH3O75995 380 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 SNX4O95219 450 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 PEX11BO96011 259 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 CGAP01215 116 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 SLC35G6P0C7Q6 338 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 MED14OSP0DP75 135 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 SAGP10523 405 aaPredicted RBP2.09□□□□□ -2.07
CTC1-207ENST00000580299 KRT3P12035 628 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 RNH1P13489 461 aaKnown RBP2.09□□□□□ -2.07
CTC1-207ENST00000580299 ATP1B2P14415 290 aaPredicted RBP2.09□□□□□ -2.07
CTC1-207ENST00000580299 CD33P20138 364 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 PGCP20142 388 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 ITGALP20701 1170 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 FUT4P22083 530 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 PTAFRP25105 342 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 PSMB5P28074 263 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 SERPINB3P29508 390 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 TLX1P31314 330 aaPredicted RBP2.09□□□□□ -2.07
CTC1-207ENST00000580299 APOBEC3AP31941 199 aaPredicted RBP2.09□□□□□ -2.07
CTC1-207ENST00000580299 CDH5P33151 784 aaPredicted RBP2.09□□□□□ -2.07
CTC1-207ENST00000580299 RPA3P35244 121 aaPredicted RBP2.09□□□□□ -2.07
CTC1-207ENST00000580299 PCK1P35558 622 aa2.09□□□□□ -2.07
CTC1-207ENST00000580299 RFX3P48380 749 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms