RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 ARMC10Q8N2F6 343 aa17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 GBP7Q8N8V2 638 aaPredicted RBP17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 SUN3Q8TAQ9 357 aa17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 RBM18Q96H35 190 aaKnown RBP17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 CENPHQ9H3R5 247 aa17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 KLHL1Q9NR64 748 aa17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 UBR5O95071 2799 aaPredicted RBP17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 PRRC2CQ9Y520 2896 aaKnown RBP17.36■□□□□ 0.37
PPP4R1-215ENST00000580182 SERTM1A2A2V5 107 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 CCDC151A5D8V7 595 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 CRCPO75575 148 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 ITGA10O75578 1167 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 NEURL1O76050 574 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 ZFAND5O76080 213 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 COX7A2P14406 83 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 PLIN5Q00G26 463 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 HSDL2Q6YN16 418 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 ZCCHC23Q6ZST2 131 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 EXOC3L1Q86VI1 746 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 ZNF227Q86WZ6 799 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 ST13P4Q8IZP2 240 aaPredicted RBP17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 SENP5Q96HI0 755 aaPredicted RBP17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 LRFN1Q9P244 771 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 CES1P1Q9UKY3 287 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 FIS1Q9Y3D6 152 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 PCDHA9Q9Y5H5 950 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 PTGDR2Q9Y5Y4 395 aa17.35■□□□□ 0.37
PPP4R1-215ENST00000580182 WWP2O00308 870 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 FCHO1O14526 889 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 PCDH7O60245 1069 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 OR10H2O60403 315 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 CHRNGP07510 517 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 PIK3R1P27986 724 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 ETV4P43268 484 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 ERVK-8P63133 956 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 RNF4P78317 190 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 PMP22Q01453 160 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 BIKQ13323 160 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 ZNF267Q14586 743 aaPredicted RBP17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 FAM180BQ6P0A1 224 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 OR4K14Q8NGD5 310 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 FAR1Q8WVX9 515 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 SCMH1Q96GD3 660 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 CNPPD1Q9BV87 410 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 EBPLQ9BY08 206 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 SENP1Q9P0U3 644 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 HEY2Q9UBP5 337 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 MCM8Q9UJA3 840 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 ERVK-19Q9WJR5 959 aa17.34■□□□□ 0.37
PPP4R1-215ENST00000580182 C1orf226A1L170 272 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 H3BQF6 201 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 CTIFO43310 598 aaKnown RBP17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 OR2J2O76002 312 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 CBX6O95503 412 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 IGKV3-11P04433 115 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 CT62P0C5K7 136 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 SLC35E2P0CK97 266 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 UROSP10746 265 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 ARRB2P32121 409 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 TRHRP34981 398 aaPredicted RBP17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 PTGER1P34995 402 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 ALDH9A1P49189 494 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 CYB561P49447 251 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 HLCSP50747 726 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 XKP51811 444 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 HK2P52789 917 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 SRSF1Q07955 248 aaKnown RBP eCLIP17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 ACSM2AQ08AH3 577 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 SPIN4Q56A73 249 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 TNFAIP8L3Q5GJ75 292 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 SPDYAQ5MJ70 313 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 ACSM2BQ68CK6 577 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 SLC48A1Q6P1K1 146 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 FAM180AQ6UWF9 173 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 TRIM46Q7Z4K8 759 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 C9orf40Q8IXQ3 194 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 C7orf57Q8NEG2 295 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 RIT1Q92963 219 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 C11orf24Q96F05 449 aaPredicted RBP17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 TRIM45Q9H8W5 580 aaPredicted RBP17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 AGPAT4Q9NRZ5 378 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 MYOTQ9UBF9 498 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 COPS7AQ9UBW8 275 aa17.33■□□□□ 0.36
PPP4R1-215ENST00000580182 GNG14A0A1W2PPG7 69 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 TMEM233B4DJY2 109 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 AZIN1O14977 448 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 NPHS1O60500 1241 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 ZNF354AO60765 605 aaPredicted RBP17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 GUCY1B2O75343 617 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 ERAL1O75616 437 aaKnown RBP17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 WISP2O76076 250 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 RASAL1O95294 804 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 CLPSP04118 112 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 BPGMP07738 259 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 SP1P08047 785 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 IL3P08700 152 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 TIA1P31483 386 aaKnown RBP eCLIP17.32■□□□□ 0.365e-6■■■■□ 20.5
PPP4R1-215ENST00000580182 TRA2BP62995 288 aaKnown RBP17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 DUSP2Q05923 314 aa17.32■□□□□ 0.36
PPP4R1-215ENST00000580182 ASPHQ12797 758 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms