RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 SREK1Q8WXA9 508 aaKnown RBP12.69□□□□□ -0.38
GGA3-208ENST00000579743 RIT1Q92963 219 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 MRRFQ96E11 262 aaKnown RBP12.69□□□□□ -0.38
GGA3-208ENST00000579743 FBXL20Q96IG2 436 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 CNPPD1Q9BV87 410 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 ENKD1Q9H0I2 346 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 IPPKQ9H8X2 491 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 DMRT3Q9NQL9 472 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 SNX15Q9NRS6 342 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 AHSPQ9NZD4 102 aa12.69□□□□□ -0.38
GGA3-208ENST00000579743 CPSF2Q9P2I0 782 aaKnown RBP12.69□□□□□ -0.38
GGA3-208ENST00000579743 ATP6AP2A0A1C7CYW4 349 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 G3V3Y1 287 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 C19orf84I3L1E1 186 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 FOXE1O00358 373 aaPredicted RBP12.68□□□□□ -0.38
GGA3-208ENST00000579743 TP53I11O14683 189 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 HCN1O60741 890 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 WDR1O75083 606 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 SMIM24O75264 130 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 GUCY1B2O75343 617 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 ATP6AP2O75787 350 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 CLDN9O95484 217 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 GPR75O95800 540 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 IGHG3P01860 377 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 INHBAP08476 426 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 RBP1P09455 135 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 NR2F6P10588 404 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 GABRA1P14867 456 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 GALNSP34059 522 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 RPS13P62277 151 aaKnown RBP12.68□□□□□ -0.38
GGA3-208ENST00000579743 RPP38P78345 283 aaKnown RBP12.68□□□□□ -0.38
GGA3-208ENST00000579743 TLE4Q04727 773 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 ZNF267Q14586 743 aaPredicted RBP12.68□□□□□ -0.38
GGA3-208ENST00000579743 PCBP2Q15366 365 aaKnown RBP eCLIP12.68□□□□□ -0.38
GGA3-208ENST00000579743 HYAL4Q2M3T9 481 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 ZNF585AQ6P3V2 769 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 B3GNT6Q6ZMB0 384 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 NCCRP1Q6ZVX7 275 aaPredicted RBP12.68□□□□□ -0.38
GGA3-208ENST00000579743 PAGE2Q7Z2X7 111 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 FAM13CQ8NE31 585 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 SPACA9Q96E40 222 aaPredicted RBP12.68□□□□□ -0.38
GGA3-208ENST00000579743 LRRC46Q96FV0 321 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 GAL3ST4Q96RP7 486 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 SERPINI1Q99574 410 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 VPS11Q9H270 941 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 MCCC2Q9HCC0 563 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 ITGB1BP2Q9UKP3 347 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 RNF6Q9Y252 685 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.68□□□□□ -0.38
GGA3-208ENST00000579743 CELSR2Q9HCU4 2923 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 ABCA12Q86UK0 2595 aa12.68□□□□□ -0.38
GGA3-208ENST00000579743 TRGV5A0A0B4J1U4 118 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 FAM90A27PA6NNH2 459 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 PLPP1O14494 284 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 AQP7O14520 342 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 PROM1O43490 865 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 GLSO94925 669 aaPredicted RBP12.67□□□□□ -0.38
GGA3-208ENST00000579743 C1QAP02745 245 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 FAM58BPP0C7Q3 252 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 PIK3R1P27986 724 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 MAGEA5P43359 124 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 DNASE1L1P49184 302 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 TMED10P49755 219 aaKnown RBP12.67□□□□□ -0.38
GGA3-208ENST00000579743 CCNG1P51959 295 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 NRG3P56975 720 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 SF3B4Q15427 424 aaKnown RBP eCLIP12.67□□□□□ -0.382e-8■■■■□ 20.6
GGA3-208ENST00000579743 CDSNQ15517 529 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 SPRED3Q2MJR0 410 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 TSNAXIP1Q2TAA8 658 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 TBCELQ5QJ74 424 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 CES4AQ5XG92 561 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 ZDHHC24Q6UX98 284 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 TRILQ7L0X0 811 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 CENPLQ8N0S6 344 aaPredicted RBP12.67□□□□□ -0.38
GGA3-208ENST00000579743 ZNF295-AS1Q8N0V1 137 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 LIX1Q8N485 282 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 TMEM251Q8N6I4 163 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 ZNF321PQ8N8H1 164 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 L3MBTL4Q8NA19 623 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 OR5M9Q8NGP3 310 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 PPWD1Q96BP3 646 aaKnown RBP12.67□□□□□ -0.38
GGA3-208ENST00000579743 DDX31Q9H8H2 851 aaKnown RBP12.67□□□□□ -0.38
GGA3-208ENST00000579743 NMRK1Q9NWW6 199 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 QPCTLQ9NXS2 382 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 ALKBH4Q9NXW9 302 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 ATG4BQ9Y4P1 393 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 CACNA1CQ13936 2221 aa12.67□□□□□ -0.38
GGA3-208ENST00000579743 A0A1B0GVC2 190 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 PINLYPA6NC86 204 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 KLK8O60259 260 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 KRT38O76015 456 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 IGKV3-11P04433 115 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 SLC35E2P0CK97 266 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 CCL3P10147 92 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 MTHFD2P13995 350 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 ZFP36L2P47974 494 aaKnown RBP12.66□□□□□ -0.38
GGA3-208ENST00000579743 SERPINB9P50453 376 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 HERVK_113P63132 956 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 ERVK-8P63133 956 aa12.66□□□□□ -0.38
GGA3-208ENST00000579743 IRF9Q00978 393 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms