RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 MYO7BQ6PIF6 2116 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 A0A1B0GUH1 482 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 G3V2L1 256 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 MANBAO00462 879 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 PLIN3O60664 434 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 ULK1O75385 1050 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 SLU7O95391 586 aaKnown RBP13.78□□□□□ -0.2
SS18-212ENST00000579061 LDLRP01130 860 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 PROCP04070 461 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 NUDT17P0C025 328 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 SLC35E2P0CK97 266 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 MYL2P10916 166 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 HMOX2P30519 316 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 HK2P52789 917 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 VSNL1P62760 191 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 ALDH6A1Q02252 535 aaKnown RBP13.78□□□□□ -0.2
SS18-212ENST00000579061 SLC18A2Q05940 514 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 GALNT1Q10472 559 aaPredicted RBP13.78□□□□□ -0.2
SS18-212ENST00000579061 CCNYL2Q5T2Q4 361 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 WDR93Q6P2C0 686 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 GFRALQ6UXV0 394 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 COMMD6Q7Z4G1 85 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.78□□□□□ -0.2
SS18-212ENST00000579061 CDYL2Q8N8U2 506 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 GBP7Q8N8V2 638 aaPredicted RBP13.78□□□□□ -0.2
SS18-212ENST00000579061 NUBPLQ8TB37 319 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 RDH11Q8TC12 318 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 METTL6Q8TCB7 284 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 EPS8L3Q8TE67 593 aaKnown RBP13.78□□□□□ -0.2
SS18-212ENST00000579061 ASB15Q8WXK1 588 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 RASL10BQ96S79 203 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 GSTO2Q9H4Y5 243 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 VPS29Q9UBQ0 182 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 SEC14L3Q9UDX4 400 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 OSGIN2Q9Y236 505 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 EML6Q6ZMW3 1958 aa13.78□□□□□ -0.2
SS18-212ENST00000579061 SERTM1A2A2V5 107 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 CCDC151A5D8V7 595 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 SMIM23A6NLE4 172 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 A8MVJ9 347 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 KLRC4-KLRK1H3BQV0 150 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 COPEO14579 308 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 OR10H2O60403 315 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 PRKRAO75569 313 aaKnown RBP13.77□□□□□ -0.21
SS18-212ENST00000579061 OR2J2O76002 312 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 ESRRBO95718 433 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 GBAP04062 536 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 GP1BBP13224 206 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 PIK3R1P27986 724 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 MAPK12P53778 367 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 PER3P56645 1201 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 DNAJB13P59910 316 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 TRA2BP62995 288 aaKnown RBP13.77□□□□□ -0.21
SS18-212ENST00000579061 RBPJQ06330 500 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 TBL3Q12788 808 aaKnown RBP13.77□□□□□ -0.21
SS18-212ENST00000579061 MPEG1Q2M385 716 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 NDUFAF5Q5TEU4 345 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 EMBQ6PCB8 327 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 ZNF321PQ8N8H1 164 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 OR4K14Q8NGD5 310 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 PPWD1Q96BP3 646 aaKnown RBP13.77□□□□□ -0.21
SS18-212ENST00000579061 GPR137Q96N19 417 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 TIMMDC1Q9NPL8 285 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 HPF1Q9NWY4 346 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 TEX10Q9NXF1 929 aaPredicted RBP13.77□□□□□ -0.21
SS18-212ENST00000579061 MID2Q9UJV3 735 aa13.77□□□□□ -0.21
SS18-212ENST00000579061 C1orf226A1L170 272 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 GLOD5A6NK44 160 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 OR6C76A6NM76 312 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 FOXO6A8MYZ6 492 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 WWP2O00308 870 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 PGRMC2O15173 223 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 UNC5CO95185 931 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 KRT4P19013 534 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 KCNK10P57789 538 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 OPN5Q6U736 354 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 DGAT2L6Q6ZPD8 337 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 SIAH3Q8IW03 269 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 SLC15A4Q8N697 577 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 PSD4Q8NDX1 1056 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 AGAP11Q8TF27 550 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 AENQ8WTP8 325 aaKnown RBP13.76□□□□□ -0.21
SS18-212ENST00000579061 CHTF18Q8WVB6 975 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 RIT1Q92963 219 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 RELTQ969Z4 430 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 ROPN1BQ9BZX4 212 aaPredicted RBP13.76□□□□□ -0.21
SS18-212ENST00000579061 LIN28AQ9H9Z2 209 aaKnown RBP13.76□□□□□ -0.21
SS18-212ENST00000579061 CXorf21Q9HAI6 301 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 ROPN1Q9HAT0 212 aaPredicted RBP13.76□□□□□ -0.21
SS18-212ENST00000579061 OXSMQ9NWU1 459 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 MKS1Q9NXB0 559 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 MCM8Q9UJA3 840 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 ERVK-11Q9UQG0 969 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 PCDHA9Q9Y5H5 950 aa13.76□□□□□ -0.21
SS18-212ENST00000579061 WASHC1A8K0Z3 465 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 LRRTM2O43300 516 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 PEX1O43933 1283 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 OR6B1O95007 311 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 RNF224P0DH78 156 aa13.75□□□□□ -0.21
SS18-212ENST00000579061 CPA3P15088 417 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms