RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 DPH1Q9BZG8 443 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 SHCBP1LQ9BZQ2 653 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 STMN4Q9H169 189 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 OR51B5Q9H339 312 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CENPHQ9H3R5 247 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ACTL8Q9H568 366 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 PRORYQ9H606 182 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CCDC134Q9H6E4 229 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 WDR54Q9H977 334 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 FANCEQ9HB96 536 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF304Q9HCX3 659 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 MID1IP1Q9NPA3 183 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 SLCO1B3Q9NPD5 702 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 TEX10Q9NXF1 929 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 AKAP7Q9P0M2 348 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 GIMAP2Q9UG22 337 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 SERTAD3Q9UJW9 196 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 CES1P1Q9UKY3 287 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 TCFL5Q9UL49 500 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 DAPP1Q9UN19 280 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 DLGAP4Q9Y2H0 992 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 STK38LQ9Y2H1 464 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 RAP2CQ9Y3L5 183 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 NAALAD2Q9Y3Q0 740 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 HS3ST3B1Q9Y662 390 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 MAU2Q9Y6X3 613 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 FAM208BQ5VWN6 2430 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 GTF3C1Q12789 2109 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 KALRNO60229 2985 aa3.56□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF407Q9C0G0 2248 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ZGRF1Q86YA3 2104 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 A0A1W2PR48 441 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TCRBV16S1A1N1A0A5B0 115 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 WDR91A4D1P6 747 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PABPN1LA6NDY0 278 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ANKDD1BA6NHY2 528 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 WASHC1A8K0Z3 465 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 FAM227AF5H4B4 570 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 K7ENP7 123 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 MASP2O00187 686 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SAP18O00422 153 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SDHDO14521 159 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PIP5K1BO14986 540 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ERI3O43414 337 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 CHST10O43529 356 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 EDF1O60869 148 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 H2AFYO75367 372 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SH3BGRLO75368 114 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PRKRAO75569 313 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 RSL1D1O76021 490 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 AIFM1O95831 613 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 CLPSP04118 112 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 EIF2S1P05198 315 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 CYC1P08574 325 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 HBQ1P09105 142 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ALDOCP09972 364 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 UROSP10746 265 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PCNAP12004 261 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 COX6A1P12074 109 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 CD1EP15812 388 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SDC1P18827 310 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TCN2P20062 427 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 NR1D1P20393 614 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 FBLP22087 321 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 GRK2P25098 689 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PTX3P26022 381 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PTPN4P29074 926 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PPP2R1BP30154 601 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TIA1P31483 386 aaKnown RBP eCLIP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 HPDP32754 393 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 GRK3P35626 688 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 DLSTP36957 453 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC1A6P48664 564 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 GPR143P51810 404 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 MTTPP55157 894 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 LIM2P55344 173 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 RAB38P57729 211 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 BTN3A2P78410 334 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 BTG2P78543 158 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 DCDP81605 110 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TNFRSF17Q02223 184 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 KLC1Q07866 573 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 RGS1Q08116 209 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 Q0VFX4 171 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 DUSP8Q13202 625 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 DDX39BQ13838 428 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PDE7AQ13946 482 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 ERV3-1Q14264 604 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 HERC3Q15034 1050 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 PCOLCEQ15113 449 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 CEBPEQ15744 281 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 RBBP7Q16576 425 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 UGT8Q16880 541 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 RFTN2Q52LD8 501 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SH2D4BQ5SQS7 431 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 TMEM164Q5U3C3 297 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 C18orf63Q68DL7 685 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 OR4C11Q6IEV9 310 aa3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 INO80CQ6PI98 192 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-215ENST00000578995 SCIMPQ6UWF3 145 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms