RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 ZNF721Q8TF20 911 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 BARD1Q99728 777 aaKnown RBP17.99■□□□□ 0.47
SS18-208ENST00000577751 EML4Q9HC35 981 aaKnown RBP17.99■□□□□ 0.47
SS18-208ENST00000577751 ABI3Q9P2A4 366 aa17.99■□□□□ 0.47
SS18-208ENST00000577751 TMEM200CA6NKL6 621 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 GABRR3A8MPY1 467 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 PYCARD-AS1I3L0S3 204 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 PCDH7O60245 1069 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 PRKNO60260 465 aaPredicted RBP17.98■□□□□ 0.47
SS18-208ENST00000577751 ZFAND5O76080 213 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 WISP1O95388 367 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 IGKV3-11P04433 115 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 SLC35E2P0CK97 266 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 PRPH2P23942 346 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 TIA1P31483 386 aaKnown RBP eCLIP17.98■□□□□ 0.47
SS18-208ENST00000577751 ARRB2P32121 409 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 CD96P40200 585 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 SERPINB4P48594 390 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 TUBA3CQ13748 450 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 CASP8Q14790 479 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 SPRED3Q2MJR0 410 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 UGT3A2Q3SY77 523 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 KANK2Q63ZY3 851 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 SLC48A1Q6P1K1 146 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 TUBA3EQ6PEY2 450 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 HSDL2Q6YN16 418 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 CLYBLQ8N0X4 340 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 CISD2Q8N5K1 135 aaKnown RBP17.98■□□□□ 0.47
SS18-208ENST00000577751 OR4K14Q8NGD5 310 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 OR8K3Q8NH51 312 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 SREK1Q8WXA9 508 aaKnown RBP17.98■□□□□ 0.47
SS18-208ENST00000577751 SENP5Q96HI0 755 aaPredicted RBP17.98■□□□□ 0.47
SS18-208ENST00000577751 METTL2AQ96IZ6 378 aaKnown RBP17.98■□□□□ 0.47
SS18-208ENST00000577751 OR8D2Q9GZM6 311 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.98■□□□□ 0.47
SS18-208ENST00000577751 TUBB1Q9H4B7 451 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 TRIM45Q9H8W5 580 aaPredicted RBP17.98■□□□□ 0.47
SS18-208ENST00000577751 PCDHGB6Q9Y5F9 930 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 DNAJC15Q9Y5T4 150 aa17.98■□□□□ 0.47
SS18-208ENST00000577751 A0A1W2PS29 197 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 SLC28A1O00337 649 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 BIRC5O15392 142 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 RSL1D1O76021 490 aaKnown RBP17.97■□□□□ 0.47
SS18-208ENST00000577751 ZWINTO95229 277 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 PIK3R1P27986 724 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 TRHRP34981 398 aaPredicted RBP17.97■□□□□ 0.47
SS18-208ENST00000577751 BTKQ06187 659 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 KIAA0040Q15053 153 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 IMPG1Q17R60 797 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 SPDYAQ5MJ70 313 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 ZNF468Q5VIY5 522 aaPredicted RBP17.97■□□□□ 0.47
SS18-208ENST00000577751 Q6ZSR9 355 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 NUDCD3Q8IVD9 361 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 MMP21Q8N119 569 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 MDS2Q8NDY4 140 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 C19orf60Q96EN9 201 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 FBXL20Q96IG2 436 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 SIGLEC12Q96PQ1 595 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 UTP23Q9BRU9 249 aaKnown RBP17.97■□□□□ 0.47
SS18-208ENST00000577751 FAIM2Q9BWQ8 316 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 STMN4Q9H169 189 aaPredicted RBP17.97■□□□□ 0.47
SS18-208ENST00000577751 TMBIM4Q9HC24 238 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 ASF1BQ9NVP2 202 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 HEY2Q9UBP5 337 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 NTNG1Q9Y2I2 539 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 TRAF6Q9Y4K3 522 aa17.97■□□□□ 0.47
SS18-208ENST00000577751 HRKO00198 91 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 DYRK3O43781 588 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 PRAMEF2O60811 474 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 DRD2P14416 443 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 GSTM5P46439 218 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 XKP51811 444 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 RNF4P78317 190 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 CES4AQ5XG92 561 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 ZNF227Q86WZ6 799 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 FAM76AQ8TAV0 307 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 C16orf78Q8WTQ4 265 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 THAP3Q8WTV1 239 aaPredicted RBP17.96■□□□□ 0.47
SS18-208ENST00000577751 RIT1Q92963 219 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 PKNOX2Q96KN3 472 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 ART5Q96L15 291 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 CXorf21Q9HAI6 301 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 ANKRD10Q9NXR5 420 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 MYOTQ9UBF9 498 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 COPS7AQ9UBW8 275 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 DLGAP4Q9Y2H0 992 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 PTGDR2Q9Y5Y4 395 aa17.96■□□□□ 0.47
SS18-208ENST00000577751 COPG1Q9Y678 874 aaKnown RBP17.96■□□□□ 0.47
SS18-208ENST00000577751 HELZ2Q9BYK8 2649 aaKnown RBP17.95■□□□□ 0.46
SS18-208ENST00000577751 GNG14A0A1W2PPG7 69 aa17.95■□□□□ 0.46
SS18-208ENST00000577751 FCHO1O14526 889 aa17.95■□□□□ 0.46
SS18-208ENST00000577751 RGS14O43566 566 aa17.95■□□□□ 0.46
SS18-208ENST00000577751 OR10H2O60403 315 aa17.95■□□□□ 0.46
SS18-208ENST00000577751 NEURL1O76050 574 aa17.95■□□□□ 0.46
SS18-208ENST00000577751 IL3P08700 152 aa17.95■□□□□ 0.46
SS18-208ENST00000577751 ANXA4P09525 319 aaPredicted RBP17.95■□□□□ 0.46
SS18-208ENST00000577751 CPMP14384 443 aa17.95■□□□□ 0.46
SS18-208ENST00000577751 PORP16435 677 aaPredicted RBP17.95■□□□□ 0.46
SS18-208ENST00000577751 ST13P50502 369 aaKnown RBP17.95■□□□□ 0.46
SS18-208ENST00000577751 OR1C1Q15619 314 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms