RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 GTDC1Q4AE62 458 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 NADK2Q4G0N4 442 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 ZNF311Q5JNZ3 666 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 SPANXN4Q5MJ08 99 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 LIPJQ5W064 366 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 Q6ZVQ6 151 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 RBM23Q86U06 439 aaKnown RBP4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 RANBP3LQ86VV4 465 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 CACUL1Q86Y37 369 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 PARP8Q8N3A8 854 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 GVQW1Q8N7I0 195 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 OR52M1Q8NGK5 317 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 MAPK15Q8TD08 544 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 P3H4Q92791 437 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 RAB40CQ96S21 281 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 RAB11FIP5Q9BXF6 653 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 MRPL13Q9BYD1 178 aaKnown RBP4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 EGLN1Q9GZT9 426 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 RAB33BQ9H082 229 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 MTHFD2LQ9H903 347 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 C3orf14Q9HBI5 128 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 DCAF16Q9NXF7 216 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 ATP6V1HQ9UI12 483 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 HPCAL4Q9UM19 191 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 FOXJ3Q9UPW0 622 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 ZMYM6O95789 1325 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 FGD5Q6ZNL6 1462 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 C15orf38-AP3S2A0A0A6YYH1 394 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 A8MUI8 341 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 ERVV-2B6SEH9 535 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 H3BTX0 84 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 BUB3O43684 328 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 PCDH7O60245 1069 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 CIDEAO60543 219 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 MTRF1O75570 445 aaKnown RBP4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 CDC123O75794 336 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 KRT36O76013 467 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 AP2A2O94973 939 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 APBB3O95704 486 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 FCER2P06734 321 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 F7P08709 466 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 FAM157CP0CG43 387 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 MYOGP15173 224 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 PAICSP22234 425 aaKnown RBP4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 MARK3P27448 753 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 GPR183P32249 361 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 NDST1P52848 882 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 LINC00205P59089 165 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 ILF3Q12906 894 aaKnown RBP eCLIP4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 SNTB2Q13425 540 aaKnown RBP4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 RIPK1Q13546 671 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 PARP6Q2NL67 630 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 ADPRMQ3LIE5 342 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 ACSF3Q4G176 576 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 CENPPQ6IPU0 288 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 NIPAL3Q6P499 406 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 C19orf48Q6RUI8 117 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 PRSS57Q6UWY2 283 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 Q6ZRG5 221 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 SH2D5Q6ZV89 423 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 PAQR9Q6ZVX9 377 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 CHMP1BQ7LBR1 199 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 VASH2Q86V25 355 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 FAM131BQ86XD5 332 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 DND1Q8IYX4 353 aaKnown RBP4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 SLC22A15Q8IZD6 547 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 RAB42Q8N4Z0 105 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 BANPQ8N9N5 519 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 CNBD1Q8NA66 436 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 KBTBD3Q8NAB2 608 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 ICA1LQ8NDH6 482 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 OR5M9Q8NGP3 310 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 OR2T11Q8NH01 316 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 PNPLA2Q96AD5 504 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 VPS35Q96QK1 796 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 KRT12Q99456 494 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 RBM24Q9BX46 236 aaKnown RBP4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 PINK1Q9BXM7 581 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 FNDC4Q9H6D8 234 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 SLC52A3Q9NQ40 469 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 PPP2R2CQ9Y2T4 447 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 MAB21L2Q9Y586 359 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 RNF215Q9Y6U7 377 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 ZHX2Q9Y6X8 837 aa4.08□□□□□ -1.76
TRAPPC8-203ENST00000577474 CUX2O14529 1486 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 SF3B1O75533 1304 aaKnown RBP eCLIP4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 IGHV4-4A0A075B6R2 117 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 A0A0U1RQV5 110 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 MSGN1A6NI15 193 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 MEI4A8MW99 385 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 SMIM1B2RUZ4 78 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 LMO7DNF2Z398 122 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 LANCL1O43813 399 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 TSPAN2O60636 221 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 CEACAM4O75871 244 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 ANGPTL1O95841 491 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 PSMA2P25787 234 aa4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 TSFMP43897 325 aaKnown RBP4.07□□□□□ -1.76
TRAPPC8-203ENST00000577474 NPY2RP49146 381 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms