RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 SLC22A8Q8TCC7 542 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 MAIP1Q8WWC4 291 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 SLC44A1Q8WWI5 657 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 HSPBAP1Q96EW2 488 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 PERPQ96FX8 193 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 WDYHV1Q96HA8 205 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 GNRHR2Q96P88 292 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 EGFL8Q99944 293 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 DOHHQ9BU89 302 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 COPS7BQ9H9Q2 264 aaPredicted RBP9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 CNIH4Q9P003 139 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 C6orf203Q9P0P8 240 aaPredicted RBP9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 TRPS1Q9UHF7 1281 aa9.26□□□□□ -0.93
NPLOC4-220ENST00000576940 MED12Q93074 2177 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 MBD3L4A6NDZ8 208 aaPredicted RBP9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 MBD3L3A6NE82 208 aaPredicted RBP9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 NPEPPSL1A6NEC2 478 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 MBD3L5A6NJ08 208 aaPredicted RBP9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 CD8B2A6NJW9 211 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 WASHC1A8K0Z3 465 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 CES2O00748 559 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 FGF17O60258 216 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 BANF1O75531 89 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 GOSR1O95249 250 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 HPNP05981 417 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 FBXO45P0C2W1 286 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 TMIGD3P0DMS9 266 aaPredicted RBP9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 SERPINB3P29508 390 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 SOX18P35713 384 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 MSH2P43246 934 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 STT3AP46977 705 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 CBLBQ13191 982 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 RCN2Q14257 317 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 CRYMQ14894 314 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 TOMM20Q15388 145 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 FBXO48Q5FWF7 155 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 WIPI1Q5MNZ9 446 aaPredicted RBP9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 TEDDM1Q5T9Z0 273 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 PRSS57Q6UWY2 283 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 PM20D2Q8IYS1 436 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 KRT78Q8N1N4 520 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 SLC15A4Q8N697 577 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 NAT8LQ8N9F0 302 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 ACOT4Q8N9L9 421 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 MBD3L2Q8NHZ7 208 aaPredicted RBP9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 GABPB2Q8TAK5 448 aaPredicted RBP9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 SMPDL3BQ92485 455 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 DIO2Q92813 273 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 PIGTQ969N2 578 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 ISL2Q96A47 359 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 ESAMQ96AP7 390 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 RBM18Q96H35 190 aaKnown RBP9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 PDLIM5Q96HC4 596 aaKnown RBP9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 DGAT2Q96PD7 388 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 GAL3ST4Q96RP7 486 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 PIP5K1AQ99755 562 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 UGT2B28Q9BY64 529 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 NT5DC2Q9H857 520 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 GALNT8Q9NY28 637 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 EIF3LQ9Y262 564 aaKnown RBP9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 STAB1Q9NY15 2570 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 DOCK7Q96N67 2140 aa9.25□□□□□ -0.93
NPLOC4-220ENST00000576940 SYNDIG1LA6NDD5 238 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 NCF1BA6NI72 391 aaPredicted RBP9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 NCF1CA8MVU1 366 aaPredicted RBP9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 SIAH2O43255 324 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 ERN1O75460 977 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 IL18BPO95998 194 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 COX7A2P14406 83 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 NCF1P14598 390 aaPredicted RBP9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 PGAM1P18669 254 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 CPN2P22792 545 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 ATP5A1P25705 553 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 CPA2P48052 419 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 SLC6A12P48065 614 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 CDK9P50750 372 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 NAGLUP54802 743 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 FBXW4P57775 412 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 TBL3Q12788 808 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 ZNF460Q14592 562 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 SF3B4Q15427 424 aaKnown RBP eCLIP9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 NTRK2Q16620 822 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 FNDC7Q5VTL7 733 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 IGDCC3Q8IVU1 814 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 CNTN4Q8IWV2 1026 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 ABTB1Q969K4 478 aaPredicted RBP9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 RHBDF1Q96CC6 855 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 SORBS1Q9BX66 1292 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 UBQLN3Q9H347 655 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 CALHM2Q9HA72 323 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 LYRM4Q9HD34 91 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 PPANQ9NQ55 473 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 NPFFR2Q9Y5X5 522 aa9.24□□□□□ -0.93
NPLOC4-220ENST00000576940 IQANK1A0A1B0GTG1 560 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 ANKRD33BA6NCL7 494 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 SAP18O00422 153 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 TAPBPO15533 448 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 CRLF1O75462 422 aa9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 PRKRAO75569 313 aaKnown RBP9.23□□□□□ -0.93
NPLOC4-220ENST00000576940 CNOT4O95628 575 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms