RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 C1orf50Q9BV19 199 aa9.43□□□□□ -0.9
NDC80-204ENST00000575515 OR52A5Q9H2C5 316 aa9.43□□□□□ -0.9
NDC80-204ENST00000575515 LRTM1Q9HBL6 345 aa9.43□□□□□ -0.9
NDC80-204ENST00000575515 GPRC5BQ9NZH0 403 aa9.43□□□□□ -0.9
NDC80-204ENST00000575515 NOP53Q9NZM5 478 aaKnown RBP9.43□□□□□ -0.9
NDC80-204ENST00000575515 CTSFQ9UBX1 484 aa9.43□□□□□ -0.9
NDC80-204ENST00000575515 PRPF19Q9UMS4 504 aaKnown RBP9.43□□□□□ -0.9
NDC80-204ENST00000575515 PLCL2Q9UPR0 1127 aa9.43□□□□□ -0.9
NDC80-204ENST00000575515 MEMO1Q9Y316 297 aa9.43□□□□□ -0.9
NDC80-204ENST00000575515 MAP1AP78559 2803 aaPredicted RBP9.43□□□□□ -0.9
NDC80-204ENST00000575515 KCNE1BA0A087WTH5 132 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 NSG1A0A0A6YYJ2 146 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 A0A0J9YY10 115 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 MRASO14807 208 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 LSM1O15116 133 aaKnown RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 CFLARO15519 480 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 NRP2O60462 931 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 SLC16A8O95907 504 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 EPORP19235 508 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 DNAJA1P31689 397 aaKnown RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 HSD17B2P37059 387 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 HNF4AP41235 474 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 MRPL19P49406 292 aaKnown RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 PNLIPRP1P54315 467 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 ARSFP54793 590 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 TBPL1P62380 186 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 RPL38P63173 70 aaKnown RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 EMX2Q04743 252 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 SMU1Q2TAY7 513 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 TRMT5Q32P41 509 aaKnown RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 C6orf136Q5SQH8 315 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 THEMIS2Q5TEJ8 643 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 C1orf146Q5VVC0 180 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 TRIM46Q7Z4K8 759 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 NET1Q7Z628 596 aaPredicted RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 PRSS58Q8IYP2 241 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 PGAM4Q8N0Y7 254 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 METTL27Q8N6F8 245 aaPredicted RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 L3MBTL4Q8NA19 623 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 PPFIBP2Q8ND30 876 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 OR9I1Q8NGQ6 314 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 NRGNQ92686 78 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 TFGQ92734 400 aaPredicted RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 HAS2Q92819 552 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 STMN2Q93045 179 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 SDCCAG3Q96C92 435 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 C8orf44Q96CB5 159 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 REPS1Q96D71 796 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 ZBTB18Q99592 522 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 MVB12BQ9H7P6 319 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 WDR41Q9HAD4 459 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 CCDC177Q9NQR7 707 aaPredicted RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 SDR39U1Q9NRG7 319 aaPredicted RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 ZIM2Q9NZV7 527 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 TDRKHQ9Y2W6 561 aaKnown RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 NDUFAF1Q9Y375 327 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 POLR3HQ9Y535 204 aaPredicted RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 GPR45Q9Y5Y3 372 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 KCNE2Q9Y6J6 123 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.42□□□□□ -0.9
NDC80-204ENST00000575515 AKAP6Q13023 2319 aa9.42□□□□□ -0.9
NDC80-204ENST00000575515 RTTNQ86VV8 2226 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 FLNAP21333 2647 aaKnown RBP9.41□□□□□ -0.9
NDC80-204ENST00000575515 DSCR3O14972 297 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 PRAMEF2O60811 474 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 SEC22BO75396 215 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 SLC22A3O75751 556 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 RSL1D1O76021 490 aaKnown RBP9.41□□□□□ -0.9
NDC80-204ENST00000575515 PDE5AO76074 875 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 WDPCPO95876 746 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 PDYNP01213 254 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 PCNAP12004 261 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 ABOP16442 354 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 GNAZP19086 355 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 CCND1P24385 295 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 MAPK1P28482 360 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 HNRNPH1P31943 449 aaKnown RBP9.41□□□□□ -0.9
NDC80-204ENST00000575515 SHMT2P34897 504 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 SOX11P35716 441 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 OR1D4P47884 311 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 RAB28P51157 221 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 DIO3P55073 304 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 HMGCS1Q01581 520 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 ZNF33BQ06732 778 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 KPNB1Q14974 876 aaKnown RBP9.41□□□□□ -0.9
NDC80-204ENST00000575515 PAGE2BQ5JRK9 111 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 IL23RQ5VWK5 629 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 FRG2Q64ET8 278 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 GRHL2Q6ISB3 625 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 Q6ZSR9 355 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 COX15Q7KZN9 410 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 TMPRSS11BQ86T26 416 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 SPPL2CQ8IUH8 684 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 FAM9CQ8IZT9 166 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 OR5AR1Q8NGP9 310 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 HMGCLL1Q8TB92 370 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 ZNF480Q8WV37 535 aa9.41□□□□□ -0.9
NDC80-204ENST00000575515 NANOS1Q8WY41 292 aaKnown RBP9.41□□□□□ -0.9
NDC80-204ENST00000575515 SPDL1Q96EA4 605 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms