RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 TRMOQ9BU70 441 aa19.28■□□□□ 0.68
HCFC1R1-208ENST00000575214 AGPAT4Q9NRZ5 378 aa19.28■□□□□ 0.68
HCFC1R1-208ENST00000575214 MCM8Q9UJA3 840 aa19.28■□□□□ 0.68
HCFC1R1-208ENST00000575214 NBASA2RRP1 2371 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 SERTM1A2A2V5 107 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 PCDH7O60245 1069 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 PRKNO60260 465 aaPredicted RBP19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 UROSP10746 265 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 SPDYAQ5MJ70 313 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 CLEC6AQ6EIG7 209 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 FAM180AQ6UWF9 173 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 DGAT2L6Q6ZPD8 337 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 HORMAD2Q8N7B1 307 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 OR4K14Q8NGD5 310 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 GRHL3Q8TE85 626 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 TM4SF18Q96CE8 201 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 ART5Q96L15 291 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 FAIM2Q9BWQ8 316 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 LRFN1Q9P244 771 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 FIS1Q9Y3D6 152 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 PCDHA9Q9Y5H5 950 aa19.27■□□□□ 0.68
HCFC1R1-208ENST00000575214 GNG14A0A1W2PPG7 69 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 C1orf226A1L170 272 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 CTIFO43310 598 aaKnown RBP19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 ITGA10O75578 1167 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 CYB561P49447 251 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 TRA2BP62995 288 aaKnown RBP19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 INAQ16352 499 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 ZNF468Q5VIY5 522 aaPredicted RBP19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 SPINK14Q6IE38 97 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 LRIG3Q6UXM1 1119 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 ZCCHC23Q6ZST2 131 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 EXOC3L1Q86VI1 746 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 MMP21Q8N119 569 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 ARMC10Q8N2F6 343 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 MDS2Q8NDY4 140 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 DOK4Q8TEW6 326 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 ZNF721Q8TF20 911 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 SENP5Q96HI0 755 aaPredicted RBP19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 C5orf34Q96MH7 638 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 CNPPD1Q9BV87 410 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 LIN28AQ9H9Z2 209 aaKnown RBP19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 KLHL1Q9NR64 748 aa19.26■□□□□ 0.67
HCFC1R1-208ENST00000575214 A0A1W2PS29 197 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 TCP11X1B4DZS4 312 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 CDK2AP1O14519 115 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 AZIN1O14977 448 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 NPHS1O60500 1241 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 MYZAPP0CAP1 466 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 SLC35E2P0CK97 266 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 CD46P15529 392 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 GNLYP22749 145 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 TIA1P31483 386 aaKnown RBP eCLIP19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 UQCRFS1P47985 274 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 ALDH9A1P49189 494 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 ERVK-8P63133 956 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 ZNF267Q14586 743 aaPredicted RBP19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 NR6A1Q15406 480 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 SLC48A1Q6P1K1 146 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 TMEM156Q8N614 296 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 RIT1Q92963 219 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 EBPLQ9BY08 206 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 RRAGDQ9NQL2 400 aaPredicted RBP19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 ASH1LQ9NR48 2969 aaKnown RBP19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 ERVK-19Q9WJR5 959 aa19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 UBR5O95071 2799 aaPredicted RBP19.25■□□□□ 0.67
HCFC1R1-208ENST00000575214 ERAL1O75616 437 aaKnown RBP19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 RASAL1O95294 804 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 CHRNGP07510 517 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 BPGMP07738 259 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 SSR4P51571 173 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 XKP51811 444 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 RNF4P78317 190 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 RAE1P78406 368 aaKnown RBP19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 SPRED3Q2MJR0 410 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 C16orf47Q6ZP98 133 aaPredicted RBP19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 TRIM46Q7Z4K8 759 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 BCORP1Q8N888 145 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 OR5L2Q8NGL0 311 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 OR8K3Q8NH51 312 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 FAR1Q8WVX9 515 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 FBXL20Q96IG2 436 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 HES7Q9BYE0 225 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 EML4Q9HC35 981 aaKnown RBP19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 SSU72Q9NP77 194 aaKnown RBP19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 MYOTQ9UBF9 498 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 DLGAP4Q9Y2H0 992 aa19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 YARS2Q9Y2Z4 477 aaKnown RBP19.24■□□□□ 0.67
HCFC1R1-208ENST00000575214 GOLGA6L10A6NI86 522 aa19.23■□□□□ 0.67
HCFC1R1-208ENST00000575214 TMEM200CA6NKL6 621 aa19.23■□□□□ 0.67
HCFC1R1-208ENST00000575214 HRKO00198 91 aa19.23■□□□□ 0.67
HCFC1R1-208ENST00000575214 WWP2O00308 870 aa19.23■□□□□ 0.67
HCFC1R1-208ENST00000575214 SLC25A12O75746 678 aa19.23■□□□□ 0.67
HCFC1R1-208ENST00000575214 OR2J2O76002 312 aa19.23■□□□□ 0.67
HCFC1R1-208ENST00000575214 RSL1D1O76021 490 aaKnown RBP19.23■□□□□ 0.67
HCFC1R1-208ENST00000575214 NEURL1O76050 574 aa19.23■□□□□ 0.67
HCFC1R1-208ENST00000575214 CHEK2O96017 543 aa19.23■□□□□ 0.67
HCFC1R1-208ENST00000575214 IGKV3-11P04433 115 aa19.23■□□□□ 0.67
HCFC1R1-208ENST00000575214 IL3P08700 152 aa19.23■□□□□ 0.67
HCFC1R1-208ENST00000575214 GALNSP34059 522 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms