RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 FAM71E1Q6IPT2 247 aa15.2■□□□□ 0.02
PFN1-203ENST00000574872 DGAT2L6Q6ZPD8 337 aa15.2■□□□□ 0.02
PFN1-203ENST00000574872 LIX1Q8N485 282 aa15.2■□□□□ 0.02
PFN1-203ENST00000574872 KIF2BQ8N4N8 673 aa15.2■□□□□ 0.02
PFN1-203ENST00000574872 SLC25A23Q9BV35 468 aa15.2■□□□□ 0.02
PFN1-203ENST00000574872 WDR55Q9H6Y2 383 aaPredicted RBP15.2■□□□□ 0.02
PFN1-203ENST00000574872 UTS2RQ9UKP6 389 aa15.2■□□□□ 0.02
PFN1-203ENST00000574872 CLCA3PQ9Y6N3 262 aa15.2■□□□□ 0.02
PFN1-203ENST00000574872 ATRXP46100 2492 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 TRPC5OSA6NMA1 111 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 TCP11X1B4DZS4 312 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 SLCO1B7G3V0H7 640 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 MKRN2OSH3BPM6 223 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 SERPINA7P05543 415 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 DDCP20711 480 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 MAPK1P28482 360 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 EPHA3P29320 983 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 GSTM5P46439 218 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 STT3AP46977 705 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 GUCY1A3Q02108 690 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 LY6DQ14210 128 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 EXT1Q16394 746 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 IRAK1BP1Q5VVH5 260 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 PLAG1Q6DJT9 500 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 ANKRD26P1Q6NSI1 321 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 PCSK4Q6UW60 755 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 TICAM1Q8IUC6 712 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 SIRT6Q8N6T7 355 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 EXD3Q8N9H8 876 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 NFAM1Q8NET5 270 aaPredicted RBP15.19■□□□□ 0.02
PFN1-203ENST00000574872 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.19■□□□□ 0.02
PFN1-203ENST00000574872 BRIX1Q8TDN6 353 aaKnown RBP15.19■□□□□ 0.02
PFN1-203ENST00000574872 PTPMT1Q8WUK0 201 aaPredicted RBP15.19■□□□□ 0.02
PFN1-203ENST00000574872 NCLNQ969V3 563 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 ABHD17AQ96GS6 310 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 RBM18Q96H35 190 aaKnown RBP15.19■□□□□ 0.02
PFN1-203ENST00000574872 NUDT9Q9BW91 350 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 OR8D2Q9GZM6 311 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 LHPPQ9H008 270 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 MIEF1Q9NQG6 463 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 EXO1Q9UQ84 846 aaKnown RBP15.19■□□□□ 0.02
PFN1-203ENST00000574872 USH1CQ9Y6N9 552 aa15.19■□□□□ 0.02
PFN1-203ENST00000574872 K7EM74 188 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 DIAPH2O60879 1101 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 SLC35E2P0CK97 266 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 ICAM2P13598 275 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 CPMP14384 443 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 COX7A2P14406 83 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 EMX2Q04743 252 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 DUSP2Q05923 314 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 MYBPC3Q14896 1274 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 PTGR1Q14914 329 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 PRSS53Q2L4Q9 553 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 SLC9B1Q4ZJI4 515 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 NXNQ6DKJ4 435 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 RGS9BPQ6ZS82 235 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 IKBIPQ70UQ0 350 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 ST13P4Q8IZP2 240 aaPredicted RBP15.18■□□□□ 0.02
PFN1-203ENST00000574872 ZNF321PQ8N8H1 164 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 B3GNT7Q8NFL0 401 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 OR14A16Q8NHC5 309 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 DAZLQ92904 295 aaKnown RBP15.18■□□□□ 0.02
PFN1-203ENST00000574872 CNRIP1Q96F85 164 aaPredicted RBP15.18■□□□□ 0.02
PFN1-203ENST00000574872 THOC1Q96FV9 657 aaKnown RBP15.18■□□□□ 0.02
PFN1-203ENST00000574872 KCNK13Q9HB14 408 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 ZNF71Q9NQZ8 489 aaPredicted RBP15.18■□□□□ 0.02
PFN1-203ENST00000574872 PTGFRNQ9P2B2 879 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 PSME2Q9UL46 239 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 G3BP2Q9UN86 482 aaKnown RBP15.18■□□□□ 0.02
PFN1-203ENST00000574872 ENTPD4Q9Y227 616 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 EIF3LQ9Y262 564 aaKnown RBP15.18■□□□□ 0.02
PFN1-203ENST00000574872 ZNF780BQ9Y6R6 833 aa15.18■□□□□ 0.02
PFN1-203ENST00000574872 DOCK10Q96BY6 2186 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 TRBV11-1A0A0K0K1C0 115 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 SYNDIG1LA6NDD5 238 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 A8MUI8 341 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 HRKO00198 91 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 ZNF195O14628 629 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 VPS4BO75351 444 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 CEACAM4O75871 244 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 PDGFAP04085 211 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 G6PDP11413 515 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 PORP16435 677 aaPredicted RBP15.17■□□□□ 0.02
PFN1-203ENST00000574872 LBPP18428 481 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 NT5EP21589 574 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 DIO3P55073 304 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 ERVK-8P63133 956 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 MAD2L1Q13257 205 aaPredicted RBP15.17■□□□□ 0.02
PFN1-203ENST00000574872 TERF2Q15554 542 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 B3GNTL1Q67FW5 361 aaPredicted RBP15.17■□□□□ 0.02
PFN1-203ENST00000574872 FCRLBQ6BAA4 426 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 LARP4Q71RC2 724 aaKnown RBP eCLIP15.17■□□□□ 0.028e-19■■■■■ 29.6
PFN1-203ENST00000574872 C9orf43Q8TAL5 461 aaPredicted RBP15.17■□□□□ 0.02
PFN1-203ENST00000574872 M1APQ8TC57 530 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 SLC2A12Q8TD20 617 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 RIT1Q92963 219 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 UBL7Q96S82 380 aaPredicted RBP15.17■□□□□ 0.02
PFN1-203ENST00000574872 PELOQ9BRX2 385 aaKnown RBP15.17■□□□□ 0.02
PFN1-203ENST00000574872 CNPPD1Q9BV87 410 aa15.17■□□□□ 0.02
PFN1-203ENST00000574872 MMP25Q9NPA2 562 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms