RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 STARD7Q9NQZ5 370 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 TMEM248Q9NWD8 314 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 TAS2R7Q9NYW3 318 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 TEX13CA0A0J9YWL9 993 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 IQCMA0A1B0GVH7 501 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CSO75390 466 aaKnown RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 IL1AP01583 271 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 ATXN1LP0C7T5 689 aaKnown RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 ITPKAP23677 461 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 ACVRL1P37023 503 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 HEPACAMQ14CZ8 416 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 DEFB115Q30KQ5 88 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 LEXMQ3ZCV2 418 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 IGSF11Q5DX21 431 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CPTPQ5TA50 214 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 FAHD1Q6P587 224 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CPA6Q8N4T0 437 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 OR4A15Q8NGL6 344 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CD200R1Q8TD46 325 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 GATAD2BQ8WXI9 593 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 FATE1Q969F0 183 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 MAP4K5Q9Y4K4 846 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 SH3D21A4FU49 640 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 LINC00862A6NCI5 91 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 J3KTA2 159 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 L7N2F9 121 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 SYN3O14994 580 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 BNIP3LO60238 219 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 NCR1O76036 304 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CD160O95971 181 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 PDYNP01213 254 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 HMGA1P17096 107 aaKnown RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 PTX3P26022 381 aaPredicted RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CRYZQ08257 329 aaKnown RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 GNA13Q14344 377 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 TTLL9Q3SXZ7 439 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 ATP13A5Q4VNC0 1218 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 GLB1LQ6UWU2 654 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 FAM151BQ6UXP7 276 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 C17orf107Q6ZR85 190 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 KANSL1Q7Z3B3 1105 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 SERPINA11Q86U17 422 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 MON1AQ86VX9 555 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CFAP52Q8N1V2 620 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 OR8K3Q8NH51 312 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 RFT1Q96AA3 541 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 SLC25A46Q96AG3 418 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 POLR2J3Q9H1A7 115 aaKnown RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 OR51J1Q9H342 316 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CD93Q9NPY3 652 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CNOT2Q9NZN8 540 aaKnown RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 COPZ2Q9P299 210 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 SCML1Q9UN30 329 aa9.14□□□□□ -0.95
CCDC40-212ENST00000574799 CFAP20Q9Y6A4 193 aaKnown RBP9.14□□□□□ -0.95
CCDC40-212ENST00000574799 HYKKA2RU49 373 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 H7C2Y5 167 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 TPST2O60704 377 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 KCNK5O95279 499 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 KLKB1P03952 638 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 IFNW1P05000 195 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF30P17039 623 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 PRPS1L1P21108 318 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 XKP51811 444 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 GBX2P52951 348 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-212ENST00000574799 ERVK-21P61565 698 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 IRF8Q02556 426 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 GPR17Q13304 367 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 GRM7Q14831 915 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 MFSD13AQ14CX5 517 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 MICAQ29983 383 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 CDKL4Q5MAI5 379 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 C10orf120Q5SQS8 335 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 LAMTOR1Q6IAA8 161 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF613Q6PF04 617 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 B3GLCTQ6Y288 498 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 OR52E4Q8NGH9 312 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 OR6M1Q8NGM8 313 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 NEIL3Q8TAT5 605 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 SLC5A11Q8WWX8 675 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 MTERF1Q99551 399 aaKnown RBP9.13□□□□□ -0.95
CCDC40-212ENST00000574799 DUSP26Q9BV47 211 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 TRPM5Q9NZQ8 1165 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 NFKBIL1Q9UBC1 381 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-212ENST00000574799 SLC6A14Q9UN76 642 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 MTCL1Q9Y4B5 1905 aaKnown RBP9.13□□□□□ -0.95
CCDC40-212ENST00000574799 DMDP11532 3685 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 LOC285095A0A1B0GVY8 99 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 CLDN20P56880 219 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 SRSF11Q05519 484 aaKnown RBP9.13□□□□□ -0.95
CCDC40-212ENST00000574799 TEAD4Q15561 434 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 RRM2BQ7LG56 351 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 GPALPP1Q8IXQ4 340 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 THEM5Q8N1Q8 247 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 ANKRD53Q8N9V6 530 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 HJURPQ8NCD3 748 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-212ENST00000574799 OR4M2Q8NGB6 313 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 ADAMTS19Q8TE59 1207 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 GABARAPL3Q9BY60 117 aa9.13□□□□□ -0.95
CCDC40-212ENST00000574799 MS4A7Q9GZW8 240 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-212ENST00000574799 ASB8Q9H765 288 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms