RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 TBRG1Q3YBR2 411 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 SAXO2Q658L1 398 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 FAM131AQ6UXB0 335 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 LIPIQ6XZB0 460 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 PRR23CQ6ZRP0 262 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 USP30Q70CQ3 517 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 TRMT11Q7Z4G4 463 aaKnown RBP14.86□□□□□ -0.03
NUP88-207ENST00000573584 TEFMQ96QE5 360 aaKnown RBP14.86□□□□□ -0.03
NUP88-207ENST00000573584 NDEL1Q9GZM8 345 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 MMP28Q9H239 520 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 ABCB9Q9NP78 766 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 SLAMF7Q9NQ25 335 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 SEMA3GQ9NS98 782 aa14.86□□□□□ -0.03
NUP88-207ENST00000573584 CCDC88CQ9P219 2028 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 OBSL1O75147 1896 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 IQCMA0A1B0GVH7 501 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 CXCL10P02778 98 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 LRRC56Q8IYG6 542 aaPredicted RBP14.85□□□□□ -0.03
NUP88-207ENST00000573584 C2orf73Q8N5S3 287 aaPredicted RBP14.85□□□□□ -0.03
NUP88-207ENST00000573584 IQCF1Q8N6M8 205 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 SLC7A13Q8TCU3 470 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 TMEM203Q969S6 136 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 UBE2E3Q969T4 207 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 SLC25A46Q96AG3 418 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 ITM2BQ9Y287 266 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 KLHL20Q9Y2M5 609 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 LAMA3Q16787 3333 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 HOXC11O43248 304 aaPredicted RBP14.85□□□□□ -0.03
NUP88-207ENST00000573584 ZNF658BQ4V348 819 aaPredicted RBP14.85□□□□□ -0.03
NUP88-207ENST00000573584 ZNF805Q5CZA5 627 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 VN1R5Q7Z5H4 357 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 DDX53Q86TM3 631 aaKnown RBP14.85□□□□□ -0.03
NUP88-207ENST00000573584 SLC9B2Q86UD5 537 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 ASCC1Q8N9N2 400 aaKnown RBP14.85□□□□□ -0.03
NUP88-207ENST00000573584 ZNF689Q96CS4 500 aaPredicted RBP14.85□□□□□ -0.03
NUP88-207ENST00000573584 DEPDC7Q96QD5 511 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 WFDC6Q9BQY6 131 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 ABCG4Q9H172 646 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 OR2AG1Q9H205 316 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 TXNL4BQ9NX01 149 aaKnown RBP14.85□□□□□ -0.03
NUP88-207ENST00000573584 IL36AQ9UHA7 158 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 HCN2Q9UL51 889 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 NINQ8N4C6 2090 aa14.85□□□□□ -0.03
NUP88-207ENST00000573584 CHRM5P08912 532 aaPredicted RBP14.84□□□□□ -0.03
NUP88-207ENST00000573584 DDCP20711 480 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 HOXD10P28358 340 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 IRS1P35568 1242 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 NNMTP40261 264 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 SLAMF1Q13291 335 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 OCLNQ16625 522 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 SPDYE7PQ495Y7 208 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 RNLSQ5VYX0 342 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 C6orf120Q7Z4R8 191 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 OR4D11Q8NGI4 311 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 OR5P2Q8WZ92 322 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 IRF7Q92985 503 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 ZNF354BQ96LW1 612 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 SLC22A4Q9H015 551 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 LINC00597Q9H2U6 94 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 AHSPQ9NZD4 102 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 A0A1W2PQL4 384 aaPredicted RBP14.84□□□□□ -0.03
NUP88-207ENST00000573584 FABP12A6NFH5 140 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 HMX3A6NHT5 357 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 RTCAO00442 366 aaKnown RBP14.84□□□□□ -0.03
NUP88-207ENST00000573584 PRKYO43930 277 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 PDE9AO76083 593 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 MMP12P39900 470 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 MAPK12P53778 367 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 HSPB3Q12988 150 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 HNRNPA0Q13151 305 aaKnown RBP14.84□□□□□ -0.03
NUP88-207ENST00000573584 PIN1Q13526 163 aaPredicted RBP14.84□□□□□ -0.03
NUP88-207ENST00000573584 GLYR1Q49A26 553 aaPredicted RBP14.84□□□□□ -0.03
NUP88-207ENST00000573584 C22orf42Q6IC83 251 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 CD99L2Q8TCZ2 262 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 CREB3L4Q8TEY5 395 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 DHRS1Q96LJ7 313 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 ACAT2Q9BWD1 397 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 SEC14L3Q9UDX4 400 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 MAFFQ9ULX9 164 aa14.84□□□□□ -0.03
NUP88-207ENST00000573584 KIAA1671Q9BY89 1806 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 TSPAN11A1L157 253 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 ANKRD34BA5PLL1 514 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 CCDC182A6NF36 153 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 ANHXE9PGG2 379 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 MMP20O60882 483 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 IL1AP01583 271 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 CLEC2LP0C7M8 214 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 KCNJ5P48544 419 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 RACK1P63244 317 aaKnown RBP14.83□□□□□ -0.03
NUP88-207ENST00000573584 CNTN1Q12860 1018 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 HYAL2Q12891 473 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 CDK10Q15131 360 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 GALNT12Q8IXK2 581 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 ADGRF3Q8IZF5 1079 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 IL17RCQ8NAC3 791 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 DIRAS2Q96HU8 199 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 IL17FQ96PD4 163 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 NELL2Q99435 816 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 TTYH2Q9BSA4 534 aa14.83□□□□□ -0.03
NUP88-207ENST00000573584 EPHX3Q9H6B9 360 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms