RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SPRED3Q2MJR0 410 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 HSDL2Q6YN16 418 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 SH2D5Q6ZV89 423 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 MILR1Q7Z6M3 343 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 NUDT13Q86X67 352 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 SPPL2CQ8IUH8 684 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 GPALPP1Q8IXQ4 340 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 GSPT2Q8IYD1 628 aaKnown RBP16.03■□□□□ 0.16
SMG6-212ENST00000573153 PSD4Q8NDX1 1056 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 DOK4Q8TEW6 326 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 PPWD1Q96BP3 646 aaKnown RBP16.03■□□□□ 0.16
SMG6-212ENST00000573153 SENP5Q96HI0 755 aaPredicted RBP16.03■□□□□ 0.16
SMG6-212ENST00000573153 DMRTA2Q96SC8 542 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 BRF2Q9HAW0 419 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 SEMA4BQ9NPR2 832 aaPredicted RBP16.03■□□□□ 0.16
SMG6-212ENST00000573153 FARSBQ9NSD9 589 aaKnown RBP16.03■□□□□ 0.16
SMG6-212ENST00000573153 RYDENQ9NUL5 291 aaKnown RBP16.03■□□□□ 0.16
SMG6-212ENST00000573153 TRPS1Q9UHF7 1281 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 KLF13Q9Y2Y9 288 aaPredicted RBP16.03■□□□□ 0.16
SMG6-212ENST00000573153 NOTCH2Q04721 2471 aa16.03■□□□□ 0.16
SMG6-212ENST00000573153 CCL21O00585 134 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 DLX3O60479 287 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 GLSO94925 669 aaPredicted RBP16.02■□□□□ 0.16
SMG6-212ENST00000573153 GBAP04062 536 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 FAM58BPP0C7Q3 252 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 ATP5F1P24539 256 aaPredicted RBP16.02■□□□□ 0.16
SMG6-212ENST00000573153 GALNSP34059 522 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 HSD17B3P37058 310 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 CDH13P55290 713 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 GALNT1Q10472 559 aaPredicted RBP16.02■□□□□ 0.16
SMG6-212ENST00000573153 FOXO1Q12778 655 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 IFT88Q13099 833 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 ZNF678Q5SXM1 525 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 ZNF441Q8N8Z8 693 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 POGLUT1Q8NBL1 392 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 FAM98AQ8NCA5 519 aaKnown RBP16.02■□□□□ 0.16
SMG6-212ENST00000573153 NUBPLQ8TB37 319 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 FBXL20Q96IG2 436 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 PHF12Q96QT6 1004 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 ZNF382Q96SR6 550 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 PELOQ9BRX2 385 aaKnown RBP16.02■□□□□ 0.16
SMG6-212ENST00000573153 SH3BGRL2Q9UJC5 107 aa16.02■□□□□ 0.16
SMG6-212ENST00000573153 CSMD1Q96PZ7 3565 aa16.02■□□□□ 0.15
SMG6-212ENST00000573153 EML6Q6ZMW3 1958 aa16.02■□□□□ 0.15
SMG6-212ENST00000573153 GLOD5A6NK44 160 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 PGRMC2O15173 223 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 HS6ST1O60243 411 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 GPR75O95800 540 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 MLYCDO95822 493 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 NR2F6P10588 404 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 PYGBP11216 843 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 PRF1P14222 555 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 COX7A2P14406 83 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 ALOX15P16050 662 aaPredicted RBP16.01■□□□□ 0.15
SMG6-212ENST00000573153 TSPAN8P19075 237 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 IMPDH1P20839 514 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 PRKAA2P54646 552 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 PLIN5Q00G26 463 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 CLCQ05315 142 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 TBL3Q12788 808 aaKnown RBP16.01■□□□□ 0.15
SMG6-212ENST00000573153 MPEG1Q2M385 716 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 ZNF750Q32MQ0 723 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 ZNF791Q3KP31 576 aaPredicted RBP16.01■□□□□ 0.15
SMG6-212ENST00000573153 UNC50Q53HI1 259 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 CYP20A1Q6UW02 462 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 DOLPP1Q86YN1 238 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 TICAM1Q8IUC6 712 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 SLC22A9Q8IVM8 553 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 ST13P4Q8IZP2 240 aaPredicted RBP16.01■□□□□ 0.15
SMG6-212ENST00000573153 GHDCQ8N2G8 530 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 METTL4Q8N3J2 472 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 TMEM156Q8N614 296 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 OR52N2Q8NGI0 321 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 TMEM125Q96AQ2 219 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 MTFMTQ96DP5 389 aaKnown RBP16.01■□□□□ 0.15
SMG6-212ENST00000573153 L3HYPDHQ96EM0 354 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 TMEM237Q96Q45 408 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 MRPL1Q9BYD6 325 aaKnown RBP16.01■□□□□ 0.15
SMG6-212ENST00000573153 ELOVL6Q9H5J4 265 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 ZDHHC11Q9H8X9 412 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 PROK2Q9HC23 129 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 PRM3Q9NNZ6 103 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 AHSPQ9NZD4 102 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 DCDC2Q9UHG0 476 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 EMCNQ9ULC0 261 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 SNX6Q9UNH7 406 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 ENTPD4Q9Y227 616 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 STK38LQ9Y2H1 464 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 MEMO1Q9Y316 297 aa16.01■□□□□ 0.15
SMG6-212ENST00000573153 GTF3C1Q12789 2109 aa16■□□□□ 0.15
SMG6-212ENST00000573153 A8MVJ9 347 aa16■□□□□ 0.15
SMG6-212ENST00000573153 CT62P0C5K7 136 aa16■□□□□ 0.15
SMG6-212ENST00000573153 CCL3P10147 92 aa16■□□□□ 0.15
SMG6-212ENST00000573153 HSD3B1P14060 373 aa16■□□□□ 0.15
SMG6-212ENST00000573153 HSD3B2P26439 372 aa16■□□□□ 0.15
SMG6-212ENST00000573153 ARL1P40616 181 aaPredicted RBP16■□□□□ 0.15
SMG6-212ENST00000573153 SLC37A1P57057 533 aa16■□□□□ 0.15
SMG6-212ENST00000573153 ART3Q13508 389 aa16■□□□□ 0.15
SMG6-212ENST00000573153 PIGGQ5H8A4 983 aa16■□□□□ 0.15
SMG6-212ENST00000573153 EMC4Q5J8M3 183 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms