RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 RPS7P62081 194 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TUBA4AP68366 448 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 GUCY1B3Q02153 619 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 FPGSQ05932 587 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 ILKQ13418 452 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 NFATC2Q13469 925 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TMEM132DQ14C87 1099 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 SYPL1Q16563 259 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 CAMK4Q16566 473 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 KYAT1Q16773 422 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 C2orf68Q2NKX9 166 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 FAM214AQ32MH5 1076 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 ALS2CLQ60I27 953 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 OR2A2Q6IF42 318 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF770Q6IQ21 691 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 DOK6Q6PKX4 331 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TMPRSS11FQ6ZWK6 438 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 ARCQ7LC44 396 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 SLC26A11Q86WA9 606 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 SFR1Q86XK3 245 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 PLD3Q8IV08 490 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 ADGRG5Q8IZF4 528 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TDHQ8IZJ6 230 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TMEM123Q8N131 208 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 NAGSQ8N159 534 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 FBXL16Q8N461 479 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF276Q8N554 614 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TEX26Q8N6G2 289 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 OR10H4Q8NGA5 316 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 OR1L4Q8NGR5 311 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TEX47Q8TBZ9 253 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 PPP4R1Q8TF05 950 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 HTR3CQ8WXA8 447 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 GLYATL1Q969I3 302 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 WBP2Q969T9 261 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 ACDQ96AP0 544 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 OTUB2Q96DC9 234 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 SGK494Q96LW2 274 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 SLC22A12Q96S37 553 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TRMT61BQ9BVS5 477 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 GANQ9H2C0 597 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 NARFLQ9H6Q4 476 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 DHX33Q9H6R0 707 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 ASB8Q9H765 288 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 CLK4Q9HAZ1 481 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 LRRC4CQ9HCJ2 640 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 HINT3Q9NQE9 182 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 C8orf4Q9NR00 106 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TREX1Q9NSU2 369 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 ELOVL2Q9NXB9 296 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 NLGN3Q9NZ94 848 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 SAMHD1Q9Y3Z3 626 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 CSDC2Q9Y534 153 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TIMM22Q9Y584 194 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 TNFRSF18Q9Y5U5 241 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 HCFC2Q9Y5Z7 792 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 SALL1Q9NSC2 1324 aa4.68□□□□□ -1.66
TOPBP1-210ENST00000572787 PPIAL4CA0A0B4J2A2 164 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 A0A1W2PPK0 400 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 MYADML2A6NDP7 307 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 NPIPA3F8WFD2 350 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 TEX46H3BTG2 121 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 TPST2O60704 377 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 RPS6KA5O75582 802 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ATP6AP2O75787 350 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 NOL4O94818 638 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ZFPL1O95159 310 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 NDUFA7O95182 113 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ERBB2P04626 1255 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 SERPINA6P08185 405 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 KRT7P08729 469 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 HIST1H2AGP0C0S8 130 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 PPIAL4GP0DN37 164 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF23P17027 643 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 NR0B1P51843 470 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 WDR5P61964 334 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 SNRPNP63162 240 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 FKBP1BP68106 108 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 GLO1Q04760 184 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 TMEM62Q0P6H9 643 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 TROAPQ12815 778 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 CRMP1Q14194 572 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ESCO2Q56NI9 601 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 SUSD4Q5VX71 490 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 LIPNQ5VXI9 398 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 LIPKQ5VXJ0 399 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 NSUN5P2Q63ZY6 315 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 CAPN13Q6MZZ7 669 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 FAM151BQ6UXP7 276 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 RPTNQ6XPR3 784 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 G2E3Q7L622 706 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 FAM122BQ7Z309 247 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ABHD12BQ7Z5M8 362 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 GPR141Q7Z602 305 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 PATL1Q86TB9 770 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 SATL1Q86VE3 508 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 TMPRSS12Q86WS5 348 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 TMEM217Q8N7C4 229 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 KBTBD3Q8NAB2 608 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms