RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SMC3Q9UQE7 1217 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 TMEM184BQ9Y519 407 aaPredicted RBP5.08□□□□□ -1.6
SF3B3-214ENST00000572365 CSAG2Q9Y5P2 127 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 CLIC4Q9Y696 253 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 MPDZO75970 2070 aa5.08□□□□□ -1.6
SF3B3-214ENST00000572365 XPO1O14980 1071 aaKnown RBP5.07□□□□□ -1.6
SF3B3-214ENST00000572365 DPM1O60762 260 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 LRCH4O75427 683 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 GRAP2O75791 330 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 EML2O95834 649 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 IL7RP16871 459 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 KLK2P20151 261 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 C21orf58P58505 322 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 ZP1P60852 638 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 Q0VFX4 171 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 LRMPQ12912 555 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 NFATC2Q13469 925 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 NFATC4Q14934 902 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 CHRNA6Q15825 494 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 ADIPOQQ15848 244 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 STX1AQ16623 288 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 C2orf68Q2NKX9 166 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 CARD16Q5EG05 197 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 CEP85LQ5SZL2 805 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 CFAP58Q5T655 872 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 HIST2H2BDQ6DRA6 164 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 FAM173BQ6P4H8 233 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 RBM43Q6ZSC3 357 aaKnown RBP5.07□□□□□ -1.6
SF3B3-214ENST00000572365 KCNMB4Q86W47 210 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 CCDC65Q8IXS2 484 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 IQCKQ8N0W5 287 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 OR8H2Q8N162 312 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 TEX9Q8N6V9 391 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 LSMEM1Q8N8F7 131 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 ZNF557Q8N988 423 aaPredicted RBP5.07□□□□□ -1.6
SF3B3-214ENST00000572365 SCCPDHQ8NBX0 429 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 CXorf40AQ8TE69 158 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 ITLN2Q8WWU7 325 aaPredicted RBP5.07□□□□□ -1.6
SF3B3-214ENST00000572365 AZIN2Q96A70 460 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 PNPLA2Q96AD5 504 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 ZBTB9Q96C00 473 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 STAMBPL1Q96FJ0 436 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 EEF2KMTQ96G04 330 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 PPP1R16AQ96I34 528 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 AK8Q96MA6 479 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 OR6C1Q96RD1 312 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 PRMT1Q99873 361 aaKnown RBP5.07□□□□□ -1.6
SF3B3-214ENST00000572365 MAK16Q9BXY0 300 aaKnown RBP5.07□□□□□ -1.6
SF3B3-214ENST00000572365 FUT8Q9BYC5 575 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 ISCUQ9H1K1 167 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 BLZF1Q9H2G9 400 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 CATSPERBQ9H7T0 1116 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 ANO10Q9NW15 660 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 CISD1Q9NZ45 108 aaKnown RBP5.07□□□□□ -1.6
SF3B3-214ENST00000572365 TAAR2Q9P1P5 351 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 VPS18Q9P253 973 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 LCMT1Q9UIC8 334 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 SRPRBQ9Y5M8 271 aaKnown RBP5.07□□□□□ -1.6
SF3B3-214ENST00000572365 TLN2Q9Y4G6 2542 aa5.07□□□□□ -1.6
SF3B3-214ENST00000572365 IGLV5-39A0A0G2JS06 123 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 A0A1W2PQ09 198 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 GOLGA8KD6RF30 607 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 I6L893 689 aaPredicted RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 INSIG1O15503 277 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 SHOX2O60902 331 aaPredicted RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 SOX30O94993 753 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 TRUB2O95900 331 aaKnown RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 APOEP02649 317 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 RPN1P04843 607 aaKnown RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 RHOCP08134 193 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 ARSBP15848 533 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 FERP16591 822 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 TRIM21P19474 475 aaKnown RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 PAX7P23759 505 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 LONP1P36776 959 aaKnown RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 GNPDA1P46926 289 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 GFERP55789 205 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 P2RX3P56373 397 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 SORDQ00796 357 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 STK4Q13043 487 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 NME3Q13232 169 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 NAE1Q13564 534 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 PTGR1Q14914 329 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 SNCBQ16143 134 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 PCGF3Q3KNV8 242 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 CDONQ4KMG0 1287 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 LRRC23Q53EV4 343 aaPredicted RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 PXDC1Q5TGL8 231 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 LCN10Q6JVE6 187 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 NCCRP1Q6ZVX7 275 aaPredicted RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 ARHGAP22Q7Z5H3 698 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 CUZD1Q86UP6 607 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 HAPLN4Q86UW8 402 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 CEP97Q8IW35 865 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 CEP57L1Q8IYX8 460 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 TAGAPQ8N103 731 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 C17orf53Q8N3J3 647 aaPredicted RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 C1orf131Q8NDD1 294 aaKnown RBP5.06□□□□□ -1.6
SF3B3-214ENST00000572365 C7orf57Q8NEG2 295 aa5.06□□□□□ -1.6
SF3B3-214ENST00000572365 FAM76AQ8TAV0 307 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms