RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 SLC12A4Q9UP95 1085 aa13.54□□□□□ -0.24
LITAF-208ENST00000571627 OSGIN2Q9Y236 505 aa13.54□□□□□ -0.24
LITAF-208ENST00000571627 TMEM200CA6NKL6 621 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 ITGA10O75578 1167 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 SLC25A12O75746 678 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 ZFAND5O76080 213 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 ESRRBO95718 433 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 KLK1P06870 262 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 SP1P08047 785 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 HSD3B1P14060 373 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 HSD3B2P26439 372 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 HMOX2P30519 316 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 TLX1P31314 330 aaPredicted RBP13.53□□□□□ -0.24
LITAF-208ENST00000571627 BUD31P41223 144 aaPredicted RBP13.53□□□□□ -0.24
LITAF-208ENST00000571627 CYB561P49447 251 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 NAGLUP54802 743 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 IGLV3-21P80748 117 aaPredicted RBP13.53□□□□□ -0.24
LITAF-208ENST00000571627 MAPKAPK3Q16644 382 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 CEP85LQ5SZL2 805 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 PAGE2Q7Z2X7 111 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 CDYL2Q8N8U2 506 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 TMEM178AQ8NBL3 297 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 MORN4Q8NDC4 146 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 METTL6Q8TCB7 284 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 SSC4DQ8WTU2 575 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 TANKQ92844 425 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 DGAT2Q96PD7 388 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 TSPAN10Q9H1Z9 355 aaPredicted RBP13.53□□□□□ -0.24
LITAF-208ENST00000571627 C12orf65Q9H3J6 166 aaKnown RBP13.53□□□□□ -0.24
LITAF-208ENST00000571627 TEX10Q9NXF1 929 aaPredicted RBP13.53□□□□□ -0.24
LITAF-208ENST00000571627 ADAM29Q9UKF5 820 aa13.53□□□□□ -0.24
LITAF-208ENST00000571627 A0A1W2PS29 197 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 HRKO00198 91 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 WWP2O00308 870 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 MANBAO00462 879 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 NME2P1O60361 137 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 TRIM13O60858 407 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 ULK1O75385 1050 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 SPAG7O75391 227 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 OR2J2O76002 312 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 CRYABP02511 175 aaKnown RBP13.52□□□□□ -0.25
LITAF-208ENST00000571627 ALOX15P16050 662 aaPredicted RBP13.52□□□□□ -0.25
LITAF-208ENST00000571627 NME2P22392 152 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 TRHRP34981 398 aaPredicted RBP13.52□□□□□ -0.25
LITAF-208ENST00000571627 STT3AP46977 705 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 HLCSP50747 726 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 SSR4P51571 173 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 SLC25A25Q6KCM7 469 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 GFRALQ6UXV0 394 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 HSDL2Q6YN16 418 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 FRMD7Q6ZUT3 714 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 COMMD6Q7Z4G1 85 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.52□□□□□ -0.25
LITAF-208ENST00000571627 HOMEZQ8IX15 550 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 METTL4Q8N3J2 472 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 TMEM156Q8N614 296 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 HORMAD2Q8N7B1 307 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 GBP7Q8N8V2 638 aaPredicted RBP13.52□□□□□ -0.25
LITAF-208ENST00000571627 DNAJB8Q8NHS0 232 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 TCP10LQ8TDR4 215 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 AGAP11Q8TF27 550 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 FRMD6Q96NE9 622 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 ZIM3Q96PE6 472 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 PSMG3-AS1Q96PY0 264 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 FAM111AQ96PZ2 611 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 TRMOQ9BU70 441 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 MID1IP1Q9NPA3 183 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 PCDHGB6Q9Y5F9 930 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.25
LITAF-208ENST00000571627 CYSRT1A8MQ03 144 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 PGRMC2O15173 223 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 CTIFO43310 598 aaKnown RBP13.51□□□□□ -0.25
LITAF-208ENST00000571627 UNC5CO95185 931 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 GPR75O95800 540 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 MYZAPP0CAP1 466 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 COX7A2P14406 83 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 CHN1P15882 459 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 HTR6P50406 440 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 HK2P52789 917 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 RNF4P78317 190 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 PLIN5Q00G26 463 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 GALNT1Q10472 559 aaPredicted RBP13.51□□□□□ -0.25
LITAF-208ENST00000571627 CSTF3Q12996 717 aaKnown RBP13.51□□□□□ -0.25
LITAF-208ENST00000571627 BIKQ13323 160 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 PCLAFQ15004 111 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 BEND6Q5SZJ8 279 aaPredicted RBP13.51□□□□□ -0.25
LITAF-208ENST00000571627 CCNYL2Q5T2Q4 361 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 C10orf107Q8IVU9 208 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 MMP21Q8N119 569 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 CYP4Z2PQ8N1L4 340 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 CPSF7Q8N684 471 aaKnown RBP13.51□□□□□ -0.25
LITAF-208ENST00000571627 ZNF721Q8TF20 911 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 TMEM125Q96AQ2 219 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 KCNA7Q96RP8 456 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 STMN4Q9H169 189 aaPredicted RBP13.51□□□□□ -0.25
LITAF-208ENST00000571627 TRIM45Q9H8W5 580 aaPredicted RBP13.51□□□□□ -0.25
LITAF-208ENST00000571627 WDR41Q9HAD4 459 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 SSU72Q9NP77 194 aaKnown RBP13.51□□□□□ -0.25
LITAF-208ENST00000571627 MYOTQ9UBF9 498 aa13.51□□□□□ -0.25
LITAF-208ENST00000571627 VPS29Q9UBQ0 182 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms