RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 RAE1P78406 368 aaKnown RBP19.29■□□□□ 0.68
VPS53-210ENST00000571456 PDCD2Q16342 344 aaPredicted RBP19.29■□□□□ 0.68
VPS53-210ENST00000571456 ANKRD37Q7Z713 158 aa19.29■□□□□ 0.68
VPS53-210ENST00000571456 CLEC1AQ8NC01 280 aa19.29■□□□□ 0.68
VPS53-210ENST00000571456 APOBEC4Q8WW27 367 aaKnown RBP19.29■□□□□ 0.68
VPS53-210ENST00000571456 ZNF764Q96H86 408 aaPredicted RBP19.29■□□□□ 0.68
VPS53-210ENST00000571456 PHF12Q96QT6 1004 aa19.29■□□□□ 0.68
VPS53-210ENST00000571456 CSF3RQ99062 836 aa19.29■□□□□ 0.68
VPS53-210ENST00000571456 LPAR4Q99677 370 aa19.29■□□□□ 0.68
VPS53-210ENST00000571456 SIKE1Q9BRV8 207 aa19.29■□□□□ 0.68
VPS53-210ENST00000571456 ATP13A2Q9NQ11 1180 aa19.29■□□□□ 0.68
VPS53-210ENST00000571456 PNPOQ9NVS9 261 aa19.29■□□□□ 0.68
VPS53-210ENST00000571456 ASIC5Q9NY37 505 aa19.29■□□□□ 0.68
VPS53-210ENST00000571456 G3BP2Q9UN86 482 aaKnown RBP19.29■□□□□ 0.68
VPS53-210ENST00000571456 EIF3LQ9Y262 564 aaKnown RBP19.29■□□□□ 0.68
VPS53-210ENST00000571456 F8P00451 2351 aa19.29■□□□□ 0.68
VPS53-210ENST00000571456 CROCCQ5TZA2 2017 aa19.29■□□□□ 0.68
VPS53-210ENST00000571456 IGHV1-45A0A0A0MS14 117 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 A1L4Q6 167 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 GPR75O95800 540 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 AIFM1O95831 613 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 GBAP04062 536 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 GALNSP34059 522 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 RPL3P39023 403 aaKnown RBP19.28■□□□□ 0.68
VPS53-210ENST00000571456 OR4D2P58180 307 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 RPL38P63173 70 aaKnown RBP19.28■□□□□ 0.68
VPS53-210ENST00000571456 AIMP2Q13155 320 aaKnown RBP19.28■□□□□ 0.68
VPS53-210ENST00000571456 ATP1A4Q13733 1029 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 EXT1Q16394 746 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 DCAF10Q5QP82 559 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 C6orf136Q5SQH8 315 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 RIPOR1Q6ZS17 1223 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 TMEM132CQ8N3T6 1108 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 C16orf78Q8WTQ4 265 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 STON2Q8WXE9 905 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 CCDC134Q9H6E4 229 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 ADAP2Q9NPF8 381 aa19.28■□□□□ 0.68
VPS53-210ENST00000571456 NSG1A0A0A6YYJ2 146 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 DYRK3O43781 588 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 FURINP09958 794 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 PRR35P0CG20 571 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 COX6A1P12074 109 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 COX7A2P14406 83 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 PIK3R1P27986 724 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 TAS2R50P59544 299 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 ERVK-8P63133 956 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 BTG2P78543 158 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 EMX2Q04743 252 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 ACTN3Q08043 901 aaPredicted RBP19.27■□□□□ 0.68
VPS53-210ENST00000571456 ELAVL1Q15717 326 aaKnown RBP19.27■□□□□ 0.68
VPS53-210ENST00000571456 GALNTL6Q49A17 601 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 RFTN2Q52LD8 501 aaPredicted RBP19.27■□□□□ 0.68
VPS53-210ENST00000571456 FAM69BQ5VUD6 431 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 C18orf63Q68DL7 685 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 OGFOD2Q6N063 350 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 SLC48A1Q6P1K1 146 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 TICAM1Q8IUC6 712 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 FNDC5Q8NAU1 212 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.27■□□□□ 0.68
VPS53-210ENST00000571456 DNAJB14Q8TBM8 379 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 DAZLQ92904 295 aaKnown RBP19.27■□□□□ 0.68
VPS53-210ENST00000571456 NUF2Q9BZD4 464 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 TEX10Q9NXF1 929 aaPredicted RBP19.27■□□□□ 0.68
VPS53-210ENST00000571456 NOP53Q9NZM5 478 aaKnown RBP19.27■□□□□ 0.68
VPS53-210ENST00000571456 FBXL4Q9UKA2 621 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 VPS4AQ9UN37 437 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 DLGAP4Q9Y2H0 992 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 PTGDR2Q9Y5Y4 395 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 KCNMB2Q9Y691 235 aa19.27■□□□□ 0.68
VPS53-210ENST00000571456 PEX11AO75192 247 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 LBPP18428 481 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 MAOAP21397 527 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 GNLYP22749 145 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 HNRNPFP52597 415 aaKnown RBP19.26■□□□□ 0.67
VPS53-210ENST00000571456 PLIN5Q00G26 463 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 DEFB109BQ30KR1 87 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 SFT2D3Q587I9 215 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 IRAK1BP1Q5VVH5 260 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 JMJD6Q6NYC1 403 aaPredicted RBP19.26■□□□□ 0.67
VPS53-210ENST00000571456 ST13P4Q8IZP2 240 aaPredicted RBP19.26■□□□□ 0.67
VPS53-210ENST00000571456 TMEM52Q8NDY8 209 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 OR4K14Q8NGD5 310 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 OR14A16Q8NHC5 309 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 TSLPQ969D9 159 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 ANKRD9Q96BM1 317 aaPredicted RBP19.26■□□□□ 0.67
VPS53-210ENST00000571456 MTERF3Q96E29 417 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 RBM18Q96H35 190 aaKnown RBP19.26■□□□□ 0.67
VPS53-210ENST00000571456 C3orf30Q96M34 536 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 ALOXE3Q9BYJ1 711 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 NECTIN3Q9NQS3 549 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 RYDENQ9NUL5 291 aaKnown RBP19.26■□□□□ 0.67
VPS53-210ENST00000571456 GIMAP4Q9NUV9 329 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 TAS2R7Q9NYW3 318 aa19.26■□□□□ 0.67
VPS53-210ENST00000571456 POLR3HQ9Y535 204 aaPredicted RBP19.26■□□□□ 0.67
VPS53-210ENST00000571456 ATP6AP2A0A1C7CYW4 349 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 TBX19O60806 448 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 ATP6AP2O75787 350 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 IL3P08700 152 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 SLC35E2P0CK97 266 aa19.25■□□□□ 0.67
VPS53-210ENST00000571456 RNF224P0DH78 156 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms