RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 MAPK12P53778 367 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 RAE1P78406 368 aaKnown RBP12.47□□□□□ -0.41
RPAIN-207ENST00000570883 PLIN5Q00G26 463 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 PMP22Q01453 160 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 SRSF11Q05519 484 aaKnown RBP12.47□□□□□ -0.41
RPAIN-207ENST00000570883 INAQ16352 499 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 KRT71Q3SY84 523 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 ZNF766Q5HY98 468 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 NDUFAF5Q5TEU4 345 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 ZNF324BQ6AW86 544 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-207ENST00000570883 SPINK14Q6IE38 97 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 ST13P4Q8IZP2 240 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-207ENST00000570883 TCP10LQ8TDR4 215 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 ZNF721Q8TF20 911 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 CHTF18Q8WVB6 975 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 FAR1Q8WVX9 515 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 DAZLQ92904 295 aaKnown RBP12.47□□□□□ -0.41
RPAIN-207ENST00000570883 SCMH1Q96GD3 660 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 DGAT2Q96PD7 388 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 FAM111AQ96PZ2 611 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 SLX1AQ9BQ83 275 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 MECRQ9BV79 373 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 GATA5Q9BWX5 397 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-207ENST00000570883 SHCBP1LQ9BZQ2 653 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 TRIM45Q9H8W5 580 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-207ENST00000570883 LIN28AQ9H9Z2 209 aaKnown RBP12.47□□□□□ -0.41
RPAIN-207ENST00000570883 MID2Q9UJV3 735 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 DNAJC13O75165 2243 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 ZNF407Q9C0G0 2248 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 NINQ8N4C6 2090 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 MYO7BQ6PIF6 2116 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 DOPEY1Q5JWR5 2465 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 SERTM1A2A2V5 107 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 TYROBPO43914 113 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 ITGA10O75578 1167 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 ZFAND5O76080 213 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 TNNI3P19429 210 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 ALDH3A1P30838 453 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 HLCSP50747 726 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 NAA20P61599 178 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 OC90Q02509 493 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-207ENST00000570883 ZNF750Q32MQ0 723 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 CFAP157Q5JU67 520 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 FAM180AQ6UWF9 173 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 HSDL2Q6YN16 418 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 GBP7Q8N8V2 638 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-207ENST00000570883 ZBTB9Q96C00 473 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 TM4SF18Q96CE8 201 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 C11orf24Q96F05 449 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-207ENST00000570883 APIPQ96GX9 242 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 SENP5Q96HI0 755 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-207ENST00000570883 FBXL20Q96IG2 436 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 IQCGQ9H095 443 aaKnown RBP12.46□□□□□ -0.41
RPAIN-207ENST00000570883 WDR41Q9HAD4 459 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 KLHL1Q9NR64 748 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 AGPAT4Q9NRZ5 378 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 LRFN1Q9P244 771 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 CES1P1Q9UKY3 287 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 PCDHGB6Q9Y5F9 930 aa12.46□□□□□ -0.41
RPAIN-207ENST00000570883 PCNX1Q96RV3 2341 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 NCKAP5O14513 1909 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 FCHO1O14526 889 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 ZNF354AO60765 605 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-207ENST00000570883 TRIM13O60858 407 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 OR2J2O76002 312 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 CLPSP04118 112 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 FREM3P0C091 2139 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 COX7A2P14406 83 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 SERPINB3P29508 390 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 CYB561P49447 251 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 TDGF1P3P51864 188 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 HK2P52789 917 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 RNF4P78317 190 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 SPRED3Q2MJR0 410 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 CLEC6AQ6EIG7 209 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 SLC48A1Q6P1K1 146 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 C9orf40Q8IXQ3 194 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 BCORP1Q8N888 145 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 SUN3Q8TAQ9 357 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 ZIM3Q96PE6 472 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 SMC6Q96SB8 1091 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 CNPPD1Q9BV87 410 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 NMRK1Q9NWW6 199 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 MYOTQ9UBF9 498 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 MCM8Q9UJA3 840 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 PCDHA9Q9Y5H5 950 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 PTGDR2Q9Y5Y4 395 aa12.45□□□□□ -0.42
RPAIN-207ENST00000570883 CCDC151A5D8V7 595 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 H3BQF6 201 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 WWP2O00308 870 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 CDK2AP1O14519 115 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 PCDH7O60245 1069 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 NME2P1O60361 137 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 OR10H2O60403 315 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 SLC25A12O75746 678 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 WISP2O76076 250 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 RASAL1O95294 804 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 TUBBP07437 444 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 CHRNGP07510 517 aa12.44□□□□□ -0.42
RPAIN-207ENST00000570883 SP1P08047 785 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms