RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 OR9K2Q8NGE7 335 aa4.27□□□□□ -1.73
CHD9-220ENST00000569794 TRMT10AQ8TBZ6 339 aaKnown RBP4.27□□□□□ -1.73
CHD9-220ENST00000569794 SLC2A14Q8TDB8 520 aa4.27□□□□□ -1.73
CHD9-220ENST00000569794 GIPC3Q8TF64 312 aa4.27□□□□□ -1.73
CHD9-220ENST00000569794 PIGBQ92521 554 aa4.27□□□□□ -1.73
CHD9-220ENST00000569794 EFHD2Q96C19 240 aaPredicted RBP4.27□□□□□ -1.73
CHD9-220ENST00000569794 ZNF524Q96C55 264 aa4.27□□□□□ -1.73
CHD9-220ENST00000569794 RIOK1Q9BRS2 568 aaKnown RBP4.27□□□□□ -1.73
CHD9-220ENST00000569794 WWP1Q9H0M0 922 aa4.27□□□□□ -1.73
CHD9-220ENST00000569794 MAGT1Q9H0U3 335 aa4.27□□□□□ -1.73
CHD9-220ENST00000569794 DPEP3Q9H4B8 488 aa4.27□□□□□ -1.73
CHD9-220ENST00000569794 Q9N2K0 584 aa4.27□□□□□ -1.73
CHD9-220ENST00000569794 CRLS1Q9UJA2 301 aa4.27□□□□□ -1.73
CHD9-220ENST00000569794 RALYQ9UKM9 306 aaKnown RBP4.27□□□□□ -1.73
CHD9-220ENST00000569794 NME7Q9Y5B8 376 aa4.27□□□□□ -1.73
CHD9-220ENST00000569794 PFASO15067 1338 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 TRAV24A0A0B4J272 114 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 A0A1B0GTQ1 180 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 A0A1W2PPK0 400 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 HEATR9A2RTY3 570 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 HYKKA2RU49 373 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 SUPT3HB4E1H0 165 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 F8VVB4 439 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 F8VWA3 439 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 PDXKO00764 312 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 SPINT2O43291 252 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 ECE2O60344 883 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 RANBP6O60518 1105 aaKnown RBP4.26□□□□□ -1.73
CHD9-220ENST00000569794 ATP6AP2O75787 350 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 CPNE6O95741 557 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 CSTAP01040 98 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 MT-ND1P03886 318 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 PABPC4LP0CB38 370 aaKnown RBP4.26□□□□□ -1.73
CHD9-220ENST00000569794 PNMTP11086 282 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 SLC2A3P11169 496 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 NEFHP12036 1026 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 NMT1P30419 496 aaKnown RBP4.26□□□□□ -1.73
CHD9-220ENST00000569794 STX2P32856 288 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 CCL11P51671 97 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 NAPAP54920 295 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 RPL23AP62750 156 aaKnown RBP4.26□□□□□ -1.73
CHD9-220ENST00000569794 FKBP1BP68106 108 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 NCBP1Q09161 790 aaKnown RBP4.26□□□□□ -1.73
CHD9-220ENST00000569794 STX1AQ16623 288 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 POM121L1PQ3SYA9 428 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 AGKQ53H12 422 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 TTC23Q5W5X9 447 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 C18orf63Q68DL7 685 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 RGMBQ6NW40 437 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 FAM159AQ6UWV7 190 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 SYT10Q6XYQ8 523 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 KDM7AQ6ZMT4 941 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 C16orf62Q7Z3J2 963 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 GTSCR1Q86UQ5 136 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 WDR49Q8IV35 697 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 BEST3Q8N1M1 668 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 TCAIMQ8N3R3 496 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 SLC5A8Q8N695 610 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 GPRC5AQ8NFJ5 357 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 HMGCLL1Q8TB92 370 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 PPP4R1Q8TF05 950 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 CHPT1Q8WUD6 406 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 PHYHIPQ92561 330 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 OSTF1Q92882 214 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 NCLNQ969V3 563 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 ISG20Q96AZ6 181 aaKnown RBP4.26□□□□□ -1.73
CHD9-220ENST00000569794 ANKRD27Q96NW4 1050 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 VPS35Q96QK1 796 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 SLC22A12Q96S37 553 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 MRPL13Q9BYD1 178 aaKnown RBP4.26□□□□□ -1.73
CHD9-220ENST00000569794 GSDMCQ9BYG8 508 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 GLT8D2Q9H1C3 349 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 GSN-AS1Q9NRJ2 163 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 FAM120CQ9NX05 1096 aaKnown RBP4.26□□□□□ -1.73
CHD9-220ENST00000569794 NPAP1Q9NZP6 1156 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 RCC2Q9P258 522 aaKnown RBP4.26□□□□□ -1.73
CHD9-220ENST00000569794 SEC14L3Q9UDX4 400 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 NIP7Q9Y221 180 aaKnown RBP eCLIP4.26□□□□□ -1.73
CHD9-220ENST00000569794 TMED3Q9Y3Q3 217 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 OR10H1Q9Y4A9 318 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 ATG4BQ9Y4P1 393 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 KLK4Q9Y5K2 254 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 GREB1LQ9C091 1923 aaPredicted RBP4.26□□□□□ -1.73
CHD9-220ENST00000569794 NPC1L1Q9UHC9 1359 aa4.26□□□□□ -1.73
CHD9-220ENST00000569794 CC2D2AQ9P2K1 1620 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 FAM240BA0A1B0GVZ2 78 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 MBLAC1A4D2B0 266 aaPredicted RBP4.25□□□□□ -1.73
CHD9-220ENST00000569794 BTBD17A6NE02 478 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 ZNF879B4DU55 563 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 ANKRD66B4E2M5 251 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 CHUKO15111 745 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 ACSL4O60488 711 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 UFL1O94874 794 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 PIGNO95427 931 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 PATE4P0C8F1 98 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 OR8G3PP0DMU2 310 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 HAPLN1P10915 354 aaPredicted RBP4.25□□□□□ -1.73
CHD9-220ENST00000569794 ZNF44P15621 663 aa4.25□□□□□ -1.73
CHD9-220ENST00000569794 HNF1AP20823 631 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms