RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 DNASE1P24855 282 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 IL12RB1P42701 662 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 STK19P49842 368 aaPredicted RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 RIDAP52758 137 aaKnown RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 RELAQ04206 551 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 IL10RAQ13651 578 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 MFSD13AQ14CX5 517 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 RHBDF2Q6PJF5 856 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 TSSK4Q6SA08 328 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 GAREM2Q75VX8 874 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 PRICKLE2Q7Z3G6 844 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 TRAPPC5Q8IUR0 188 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 DEFB119Q8N690 84 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 FAM172AQ8WUF8 416 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 OR2M4Q96R27 311 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 ZNF607Q96SK3 696 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 SOX17Q9H6I2 414 aaPredicted RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 MYO18AQ92614 2054 aaKnown RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 NPIPB15A6NHN6 443 aaPredicted RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 CLDN5O00501 218 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 BANF1O75531 89 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 SERPINB7O75635 380 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 ZNF26P17031 533 aaPredicted RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 ZNF7P17097 686 aaPredicted RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 NT5EP21589 574 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 UGT1A4P22310 534 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 TGM1P22735 817 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 UGT1A3P35503 534 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 UGT1A5P35504 534 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 ALDH3B1P43353 468 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 SMCO1Q147U7 214 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 PRRT3Q5FWE3 981 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 FAM183BPQ6ZVS7 135 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 PAQR9Q6ZVX9 377 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 CYP4Z2PQ8N1L4 340 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 MARVELD2Q8N4S9 558 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 RXFP2Q8WXD0 754 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 ZNF570Q96NI8 536 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 MYOCQ99972 504 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 KLF16Q9BXK1 252 aaPredicted RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 CARS2Q9HA77 564 aaKnown RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 FAIMQ9NVQ4 179 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 WSB2Q9NYS7 404 aaPredicted RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 DRG1Q9Y295 367 aaKnown RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 KLK4Q9Y5K2 254 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 TPRP12270 2363 aaKnown RBP6.34□□□□□ -1.39
SMG1-217ENST00000569764 NLRC5Q86WI3 1866 aa6.34□□□□□ -1.39
SMG1-217ENST00000569764 TNFRSF10CO14798 259 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 SCN2BO60939 215 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 SH3BGRLO75368 114 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 APOC1P02654 83 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 CATP04040 527 aaKnown RBP6.34□□□□□ -1.4
SMG1-217ENST00000569764 CREB1P16220 341 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 PTPN4P29074 926 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 BDKRB2P30411 391 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 MAP3K8P41279 467 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 CDKN2BP42772 138 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 PNLIPRP1P54315 467 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 GNG2P59768 71 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 POU6F2P78424 691 aaPredicted RBP6.34□□□□□ -1.4
SMG1-217ENST00000569764 BOP1Q14137 746 aaKnown RBP6.34□□□□□ -1.4
SMG1-217ENST00000569764 FASTKD3Q14CZ7 662 aaKnown RBP6.34□□□□□ -1.4
SMG1-217ENST00000569764 MTX3Q5HYI7 312 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 MRNIPQ6NTE8 343 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 CLEC20AQ6ZU45 233 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 ADCK2Q7Z695 626 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 CROCCP3Q8IVE0 287 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 TP53I13Q8NBR0 393 aaPredicted RBP6.34□□□□□ -1.4
SMG1-217ENST00000569764 OR5M1Q8NGP8 315 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 OR10T2Q8NGX3 314 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 ELP5Q8TE02 316 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 RERGQ96A58 199 aaPredicted RBP6.34□□□□□ -1.4
SMG1-217ENST00000569764 OXNAD1Q96HP4 312 aaPredicted RBP6.34□□□□□ -1.4
SMG1-217ENST00000569764 CD180Q99467 661 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 ASCL2Q99929 193 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 WDR83Q9BRX9 315 aaKnown RBP6.34□□□□□ -1.4
SMG1-217ENST00000569764 CPEB1Q9BZB8 566 aaKnown RBP6.34□□□□□ -1.4
SMG1-217ENST00000569764 FAM83DQ9H4H8 585 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 MAN2C1Q9NTJ4 1040 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 PISDQ9UG56 409 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 MFHAS1Q9Y4C4 1052 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 RNF215Q9Y6U7 377 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 TRANK1O15050 2925 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 NUP205Q92621 2012 aa6.34□□□□□ -1.4
SMG1-217ENST00000569764 FRMPD3Q5JV73 1810 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 OR2AT4A6NND4 320 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 ERI2A8K979 691 aaKnown RBP6.33□□□□□ -1.4
SMG1-217ENST00000569764 I6L893 689 aaPredicted RBP6.33□□□□□ -1.4
SMG1-217ENST00000569764 SEC14L5O43304 696 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 DNPH1O43598 174 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 FTH1P19P0C7X4 201 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 DRD5P21918 477 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 MPIP34949 423 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 ECI1P42126 302 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 CSNK1EP49674 416 aaKnown RBP6.33□□□□□ -1.4
SMG1-217ENST00000569764 RASSF2P50749 326 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 MAP2K6P52564 334 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 IL10RBQ08334 325 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 PUDPQ08623 228 aa6.33□□□□□ -1.4
SMG1-217ENST00000569764 HLA-BQ31612 363 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms