RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 GFM2Q969S9 779 aaKnown RBP12.22□□□□□ -0.45
CNOT1-217ENST00000569263 EXOSC8Q96B26 276 aaKnown RBP12.22□□□□□ -0.45
CNOT1-217ENST00000569263 WDR77Q9BQA1 342 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-217ENST00000569263 TRIM55Q9BYV6 548 aa12.22□□□□□ -0.45
CNOT1-217ENST00000569263 WDR55Q9H6Y2 383 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-217ENST00000569263 EHD3Q9NZN3 535 aa12.22□□□□□ -0.45
CNOT1-217ENST00000569263 UTS2RQ9UKP6 389 aa12.22□□□□□ -0.45
CNOT1-217ENST00000569263 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
CNOT1-217ENST00000569263 CLDN16Q9Y5I7 305 aa12.22□□□□□ -0.45
CNOT1-217ENST00000569263 ZNF780BQ9Y6R6 833 aa12.22□□□□□ -0.45
CNOT1-217ENST00000569263 A6NL46 340 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 WASHC1A8K0Z3 465 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 C17orf105B2RV13 164 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 EDF1O60869 148 aaKnown RBP12.21□□□□□ -0.45
CNOT1-217ENST00000569263 VIMP08670 466 aaKnown RBP12.21□□□□□ -0.45
CNOT1-217ENST00000569263 PRR35P0CG20 571 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 SLC35E2P0CK97 266 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 CPMP14384 443 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 DDX5P17844 614 aaKnown RBP12.21□□□□□ -0.45
CNOT1-217ENST00000569263 RPL3P39023 403 aaKnown RBP12.21□□□□□ -0.45
CNOT1-217ENST00000569263 XKP51811 444 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 POLE2P56282 527 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 SLC26A5P58743 744 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 PTGR1Q14914 329 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 SLC9B1Q4ZJI4 515 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 PLAG1Q6DJT9 500 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 ACAD11Q709F0 780 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 LARP4Q71RC2 724 aaKnown RBP eCLIP12.21□□□□□ -0.45
CNOT1-217ENST00000569263 MAVSQ7Z434 540 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 TICAM1Q8IUC6 712 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 SAMD14Q8IZD0 417 aaPredicted RBP12.21□□□□□ -0.45
CNOT1-217ENST00000569263 FAM9CQ8IZT9 166 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 B3GNT7Q8NFL0 401 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 THOC3Q96J01 351 aaKnown RBP12.21□□□□□ -0.45
CNOT1-217ENST00000569263 EGLN2Q96KS0 407 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 ART5Q96L15 291 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 IMMP1LQ96LU5 166 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 BBS4Q96RK4 519 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 REEP4Q9H6H4 257 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 ASIC5Q9NY37 505 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 BAIAP2L1Q9UHR4 511 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 CES1P1Q9UKY3 287 aa12.21□□□□□ -0.45
CNOT1-217ENST00000569263 DSPP15924 2871 aaKnown RBP12.21□□□□□ -0.45
CNOT1-217ENST00000569263 ZZEF1O43149 2961 aa12.21□□□□□ -0.46
CNOT1-217ENST00000569263 MKRN2OSH3BPM6 223 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 POLR3GO15318 223 aaPredicted RBP12.2□□□□□ -0.46
CNOT1-217ENST00000569263 KLHL41O60662 606 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 TGDSO95455 350 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 SERPINA7P05543 415 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 CELA2AP08217 269 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 G6PDP11413 515 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 PORP16435 677 aaPredicted RBP12.2□□□□□ -0.46
CNOT1-217ENST00000569263 CSNK2A2P19784 350 aaPredicted RBP12.2□□□□□ -0.46
CNOT1-217ENST00000569263 NT5EP21589 574 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 NTSP30990 170 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 FEN1P39748 380 aaKnown RBP12.2□□□□□ -0.46
CNOT1-217ENST00000569263 PGDP52209 483 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 AQP5P55064 265 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 RAPSNQ13702 412 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 OGFOD2Q6N063 350 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 FAM180BQ6P0A1 224 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 EPGNQ6UW88 154 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 R3HCC1LQ7Z5L2 792 aaKnown RBP12.2□□□□□ -0.46
CNOT1-217ENST00000569263 SPATA19Q7Z5L4 167 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 LRRC25Q8N386 305 aaPredicted RBP12.2□□□□□ -0.46
CNOT1-217ENST00000569263 CEP70Q8NHQ1 597 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.2□□□□□ -0.46
CNOT1-217ENST00000569263 M1APQ8TC57 530 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 ACTRT2Q8TDY3 377 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 RIT1Q92963 219 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 PPWD1Q96BP3 646 aaKnown RBP12.2□□□□□ -0.46
CNOT1-217ENST00000569263 PPCDCQ96CD2 204 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 SLC25A23Q9BV35 468 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 LHPPQ9H008 270 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 CCDC134Q9H6E4 229 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 KCNK13Q9HB14 408 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 SLC35C2Q9NQQ7 365 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 GPR83Q9NYM4 423 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 COPS7AQ9UBW8 275 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 CFAP47Q6ZTR5 3102 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 MED13Q9UHV7 2174 aa12.2□□□□□ -0.46
CNOT1-217ENST00000569263 A0A1W2PS29 197 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 ERVH48-1M5A8F1 160 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 ZNF195O14628 629 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 SCAMP2O15127 329 aaKnown RBP12.19□□□□□ -0.46
CNOT1-217ENST00000569263 TROVE2P10155 538 aaKnown RBP eCLIP12.19□□□□□ -0.46
CNOT1-217ENST00000569263 ITGAMP11215 1152 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 GALNSP34059 522 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 DIO3P55073 304 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 Q0VFX4 171 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 MYBPC3Q14896 1274 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 ZNF750Q32MQ0 723 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 ANKRD26P1Q6NSI1 321 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 JMJD6Q6NYC1 403 aaPredicted RBP12.19□□□□□ -0.46
CNOT1-217ENST00000569263 GALNT12Q8IXK2 581 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 MORN4Q8NDC4 146 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 SLC2A12Q8TD20 617 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 PTPMT1Q8WUK0 201 aaPredicted RBP12.19□□□□□ -0.46
CNOT1-217ENST00000569263 TTC9Q92623 222 aa12.19□□□□□ -0.46
CNOT1-217ENST00000569263 NCLNQ969V3 563 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms