RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 OR6B1O95007 311 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 OR4F21O95013 312 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 CLDN1O95832 211 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 RASA2Q15283 850 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 SPRED3Q2MJR0 410 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 RNFT1Q5M7Z0 435 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 CCNYL2Q5T2Q4 361 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 OR52E8Q6IFG1 317 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 MAMDC2Q7Z304 686 aaPredicted RBP18.82■□□□□ 0.6
CLK3-225ENST00000569063 FJX1Q86VR8 437 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 NUBPLQ8TB37 319 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 UCN3Q969E3 161 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 HPF1Q9NWY4 346 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 TEX10Q9NXF1 929 aaPredicted RBP18.82■□□□□ 0.6
CLK3-225ENST00000569063 SLC12A4Q9UP95 1085 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 ERVK-11Q9UQG0 969 aa18.82■□□□□ 0.6
CLK3-225ENST00000569063 UTP20O75691 2785 aaKnown RBP18.81■□□□□ 0.6
CLK3-225ENST00000569063 ARHGAP10A1A4S6 786 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 HRKO00198 91 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 PGRMC2O15173 223 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 ASNA1O43681 348 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 PEX1O43933 1283 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 OR10H2O60403 315 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 SLC35E2P0CK97 266 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 ZNF24P17028 368 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 SOX3P41225 446 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 CA7P43166 264 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 MEOX1P50221 254 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 GALNT1Q10472 559 aaPredicted RBP18.81■□□□□ 0.6
CLK3-225ENST00000569063 TBL3Q12788 808 aaKnown RBP18.81■□□□□ 0.6
CLK3-225ENST00000569063 MPEG1Q2M385 716 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 IL20RBQ6UXL0 311 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 COMMD6Q7Z4G1 85 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 C16orf52Q8NHV5 167 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 RIT1Q92963 219 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 TSPAN10Q9H1Z9 355 aaPredicted RBP18.81■□□□□ 0.6
CLK3-225ENST00000569063 ANKZF1Q9H8Y5 726 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 NMRK1Q9NWW6 199 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 EMCNQ9ULC0 261 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 STK38LQ9Y2H1 464 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 ZNF835Q9Y2P0 537 aa18.81■□□□□ 0.6
CLK3-225ENST00000569063 SVILO95425 2214 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 TRGV8A0A0C4DH27 118 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 SLC19A2O60779 497 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 GLRA3O75311 464 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 KRT6AP02538 564 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 KRT6BP04259 564 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 HSD3B1P14060 373 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 HSD3B2P26439 372 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 KRT6CP48668 564 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 MAPK12P53778 367 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 PIGGQ5H8A4 983 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 NDUFAF5Q5TEU4 345 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 BNC2Q6ZN30 1099 aaPredicted RBP18.8■□□□□ 0.6
CLK3-225ENST00000569063 Q6ZPB1 254 aaPredicted RBP18.8■□□□□ 0.6
CLK3-225ENST00000569063 GPRIN3Q6ZVF9 776 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 C9orf40Q8IXQ3 194 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 CDYL2Q8N8U2 506 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 ZFP62Q8NB50 900 aaPredicted RBP18.8■□□□□ 0.6
CLK3-225ENST00000569063 PSD4Q8NDX1 1056 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 CCDC126Q96EE4 140 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 RYDENQ9NUL5 291 aaKnown RBP18.8■□□□□ 0.6
CLK3-225ENST00000569063 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLK3-225ENST00000569063 VPS29Q9UBQ0 182 aa18.8■□□□□ 0.6
CLK3-225ENST00000569063 FOXO6A8MYZ6 492 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 G3V2L1 256 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 MANBAO00462 879 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 ZNF354AO60765 605 aaPredicted RBP18.79■□□□□ 0.6
CLK3-225ENST00000569063 GUCY1B2O75343 617 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 PIK3R1P27986 724 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 SLCO1A2P46721 670 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 PKNOX1P55347 436 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 ERVK-8P63133 956 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 LCP2Q13094 533 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 ZNF267Q14586 743 aaPredicted RBP18.79■□□□□ 0.6
CLK3-225ENST00000569063 OPN5Q6U736 354 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 SPPL2CQ8IUH8 684 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 GHDCQ8N2G8 530 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 GOLM1Q8NBJ4 401 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 OR4K14Q8NGD5 310 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 SREK1Q8WXA9 508 aaKnown RBP18.79■□□□□ 0.6
CLK3-225ENST00000569063 SGCZQ96LD1 299 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 CNPPD1Q9BV87 410 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 ERVK-19Q9WJR5 959 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 ICE1Q9Y2F5 2266 aa18.79■□□□□ 0.6
CLK3-225ENST00000569063 ZG16O60844 167 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 ULK1O75385 1050 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 ENO1P06733 434 aaKnown RBP18.78■□□□□ 0.6
CLK3-225ENST00000569063 KRT15P19012 456 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 CRHR1P34998 444 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 CCT5P48643 541 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 CASP6P55212 293 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 SLC37A1P57057 533 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 GPR85P60893 370 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 ASPHQ12797 758 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 CSTF3Q12996 717 aaKnown RBP18.78■□□□□ 0.6
CLK3-225ENST00000569063 CCDC153Q494R4 210 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 TCHHL1Q5QJ38 904 aaPredicted RBP18.78■□□□□ 0.6
CLK3-225ENST00000569063 FAM219BQ5XKK7 198 aa18.78■□□□□ 0.6
CLK3-225ENST00000569063 HIST2H2BCQ6DN03 193 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms