RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 CLDN8P56748 225 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 GNGT1P63211 74 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 ELAVL1Q15717 326 aaKnown RBP15.67■□□□□ 0.1
COMMD4-224ENST00000568877 PAPD4Q6PIY7 484 aaKnown RBP15.67■□□□□ 0.1
COMMD4-224ENST00000568877 ST13P4Q8IZP2 240 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-224ENST00000568877 MTERF3Q96E29 417 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 RBM18Q96H35 190 aaKnown RBP15.67■□□□□ 0.1
COMMD4-224ENST00000568877 DGAT2Q96PD7 388 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 LPAR4Q99677 370 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 PELOQ9BRX2 385 aaKnown RBP15.67■□□□□ 0.1
COMMD4-224ENST00000568877 TUBB6Q9BUF5 446 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 SLC35C2Q9NQQ7 365 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 GPR45Q9Y5Y3 372 aa15.67■□□□□ 0.1
COMMD4-224ENST00000568877 LAMA5O15230 3695 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 PCSK5Q92824 1860 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 A0A1W2PS29 197 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 ARGFXA6NJG6 315 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 UBDO15205 165 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 OR10H2O60403 315 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 TBX19O60806 448 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 SEC24DO94855 1032 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-224ENST00000568877 CPMP14384 443 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 PORP16435 677 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-224ENST00000568877 TNNI3P19429 210 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 HPCAL1P37235 193 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 RPL3P39023 403 aaKnown RBP15.66■□□□□ 0.1
COMMD4-224ENST00000568877 FEN1P39748 380 aaKnown RBP15.66■□□□□ 0.1
COMMD4-224ENST00000568877 SEC24CP53992 1094 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 RRADP55042 308 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 C21orf58P58505 322 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 PLIN5Q00G26 463 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 PDE7AQ13946 482 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 PRSS53Q2L4Q9 553 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 ZNF750Q32MQ0 723 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 DCAF10Q5QP82 559 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 TMEM198Q66K66 360 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 FAM180BQ6P0A1 224 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 R3HCC1LQ7Z5L2 792 aaKnown RBP15.66■□□□□ 0.1
COMMD4-224ENST00000568877 RIMKLAQ8IXN7 391 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 SAMD14Q8IZD0 417 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-224ENST00000568877 KRTCAP2Q8N6L1 136 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 TMEM102Q8N9M5 508 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-224ENST00000568877 PPWD1Q96BP3 646 aaKnown RBP15.66■□□□□ 0.1
COMMD4-224ENST00000568877 PPCDCQ96CD2 204 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 CNRIP1Q96F85 164 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-224ENST00000568877 ZNF764Q96H86 408 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-224ENST00000568877 IMMP1LQ96LU5 166 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 ZNF681Q96N22 645 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 DPY30Q9C005 99 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 ZNF160Q9HCG1 818 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 GIMAP4Q9NUV9 329 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 SH3BP4Q9P0V3 963 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 ATP6V1HQ9UI12 483 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 MAPRE3Q9UPY8 281 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 ENTPD4Q9Y227 616 aa15.66■□□□□ 0.1
COMMD4-224ENST00000568877 GMNCA6NCL1 334 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 SAGE2PA6NJ88 616 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 GABRR3A8MPY1 467 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 E9PBE3 544 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 MASP2O00187 686 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 ANKRD28O15084 1053 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 SCAMP2O15127 329 aaKnown RBP15.65■□□□□ 0.1
COMMD4-224ENST00000568877 KLHL41O60662 606 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 COX7A2P14406 83 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 IDO1P14902 403 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 DDX5P17844 614 aaKnown RBP15.65■□□□□ 0.1
COMMD4-224ENST00000568877 SLC26A5P58743 744 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 RPS6KA2Q15349 733 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 TERF2Q15554 542 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 GSTA3Q16772 222 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 CPZQ66K79 652 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 ANKRD26P1Q6NSI1 321 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 DGAT2L6Q6ZPD8 337 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 OR14A16Q8NHC5 309 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 PTPMT1Q8WUK0 201 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-224ENST00000568877 DAZLQ92904 295 aaKnown RBP15.65■□□□□ 0.1
COMMD4-224ENST00000568877 CRELD1Q96HD1 420 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 MARK4Q96L34 752 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 RILPQ96NA2 401 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 PRPF18Q99633 342 aaKnown RBP15.65■□□□□ 0.1
COMMD4-224ENST00000568877 TMEM120AQ9BXJ8 343 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 BRINP2Q9C0B6 783 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 ING2Q9H160 280 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 PRORYQ9H606 182 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 KLHL14Q9P2G3 628 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 G3BP2Q9UN86 482 aaKnown RBP15.65■□□□□ 0.1
COMMD4-224ENST00000568877 KCNMB2Q9Y691 235 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 CLCA3PQ9Y6N3 262 aa15.65■□□□□ 0.1
COMMD4-224ENST00000568877 C17orf105B2RV13 164 aa15.64■□□□□ 0.09
COMMD4-224ENST00000568877 ICAM2P13598 275 aa15.64■□□□□ 0.09
COMMD4-224ENST00000568877 GALNSP34059 522 aa15.64■□□□□ 0.09
COMMD4-224ENST00000568877 ARFIP2P53365 341 aa15.64■□□□□ 0.09
COMMD4-224ENST00000568877 NME5P56597 212 aa15.64■□□□□ 0.09
COMMD4-224ENST00000568877 DUSP2Q05923 314 aa15.64■□□□□ 0.09
COMMD4-224ENST00000568877 SF3A3Q12874 501 aaKnown RBP eCLIP15.64■□□□□ 0.09
COMMD4-224ENST00000568877 AIMP2Q13155 320 aaKnown RBP15.64■□□□□ 0.09
COMMD4-224ENST00000568877 CEBPEQ15744 281 aa15.64■□□□□ 0.09
COMMD4-224ENST00000568877 EXT1Q16394 746 aa15.64■□□□□ 0.09
COMMD4-224ENST00000568877 PDCD4Q53EL6 469 aaKnown RBP15.64■□□□□ 0.09
COMMD4-224ENST00000568877 ZNF385BQ569K4 471 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms