RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 C16orf47Q6ZP98 133 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-209ENST00000567635 Q6ZPB1 254 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-209ENST00000567635 MDGA2Q7Z553 956 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 LCA5Q86VQ0 697 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 SIAH3Q8IW03 269 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 CNPY4Q8N129 248 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 SLC34A3Q8N130 599 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 GHDCQ8N2G8 530 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 CPSF7Q8N684 471 aaKnown RBP6.42□□□□□ -1.38
SF3B3-209ENST00000567635 ZNF321PQ8N8H1 164 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 OR52B6Q8NGF0 335 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 SLC2A12Q8TD20 617 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 ZNF721Q8TF20 911 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 SREK1Q8WXA9 508 aaKnown RBP6.42□□□□□ -1.38
SF3B3-209ENST00000567635 ASB15Q8WXK1 588 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 PPWD1Q96BP3 646 aaKnown RBP6.42□□□□□ -1.38
SF3B3-209ENST00000567635 MAGED4Q96JG8 741 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 NSUN5Q96P11 429 aaKnown RBP6.42□□□□□ -1.38
SF3B3-209ENST00000567635 ZNF717Q9BY31 904 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-209ENST00000567635 WDR41Q9HAD4 459 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 ZBTB26Q9HCK0 441 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 SEMA4BQ9NPR2 832 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-209ENST00000567635 NMRK1Q9NWW6 199 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 HPF1Q9NWY4 346 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 AHSPQ9NZD4 102 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 XPR1Q9UBH6 696 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 SUCOQ9UBS9 1254 aaKnown RBP6.42□□□□□ -1.38
SF3B3-209ENST00000567635 COPS7AQ9UBW8 275 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 ADAM29Q9UKF5 820 aa6.42□□□□□ -1.38
SF3B3-209ENST00000567635 TEX15Q9BXT5 2789 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 MED12Q93074 2177 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 IQANK1A0A1B0GTG1 560 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ARHGAP10A1A4S6 786 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 A8MT66 165 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 PPP6CO00743 305 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 TFECO14948 347 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 PGRMC2O15173 223 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 OR10H2O60403 315 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 OR6B1O95007 311 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 SEMA3DO95025 777 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 PDYNP01213 254 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 GBAP04062 536 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 KLK1P06870 262 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 SBK3P0C264 359 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 SLC35E2P0CK97 266 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 NR2F6P10588 404 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ESRRAP11474 423 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ABOP16442 354 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 IMPDH1P20839 514 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 CNR1P21554 472 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 PIK3R1P27986 724 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 GALNSP34059 522 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 HSD17B3P37058 310 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 DCTP40126 519 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 SOX3P41225 446 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 CDH13P55290 713 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 HERVK_113P63132 956 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 PLIN5Q00G26 463 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 TRAF3Q13114 568 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ZNF267Q14586 743 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 C3AR1Q16581 482 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 MPEG1Q2M385 716 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ZNF750Q32MQ0 723 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 GGTA1PQ4G0N0 100 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 CCNYL2Q5T2Q4 361 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 SP5Q6BEB4 398 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 XKRXQ6PP77 449 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 OPN5Q6U736 354 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 RTL4Q6ZR62 310 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 RPS27LQ71UM5 84 aaKnown RBP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 PAGE2Q7Z2X7 111 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 NUDT13Q86X67 352 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ST13P4Q8IZP2 240 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 SLC15A4Q8N697 577 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 EIF1ADQ8N9N8 165 aaKnown RBP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ZFP62Q8NB50 900 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 PSD4Q8NDX1 1056 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 OR4F6Q8NGB9 312 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 OR4K14Q8NGD5 310 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 C16orf52Q8NHV5 167 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ACMSDQ8TDX5 336 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 TRPC4APQ8TEL6 797 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ZNF483Q8TF39 744 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 RIT1Q92963 219 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 FBXL20Q96IG2 436 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ART5Q96L15 291 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 SGCZQ96LD1 299 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 RASL10BQ96S79 203 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 PELOQ9BRX2 385 aaKnown RBP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 C1QTNF3Q9BXJ4 246 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ERVK-6Q9BXR3 956 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 MRPL1Q9BYD6 325 aaKnown RBP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 PARD6BQ9BYG5 372 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 TXLNGYQ9BZA5 131 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 ELOVL6Q9H5J4 265 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 TMEM216Q9P0N5 145 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 FETUBQ9UGM5 382 aa6.41□□□□□ -1.38
SF3B3-209ENST00000567635 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.41□□□□□ -1.38
SF3B3-209ENST00000567635 DCDC2Q9UHG0 476 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms