RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 GASTP01350 101 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 ENDOUP21128 410 aaKnown RBP15.93■□□□□ 0.14
CMTM3-213ENST00000566756 DEFA1P59665 94 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 DEFA3P59666 94 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 PRSS53Q2L4Q9 553 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 PRAMEF14Q5SWL7 426 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 PRAMEF13Q5VWM6 474 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 VN1R5Q7Z5H4 357 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 CCDC190Q86UF4 302 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 OR2L2Q8NH16 312 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 OR5AK3PQ8NH89 298 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 GTPBP3Q969Y2 492 aaKnown RBP15.93■□□□□ 0.14
CMTM3-213ENST00000566756 HDAC8Q9BY41 377 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 SPNS1Q9H2V7 528 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 CXorf36Q9H7Y0 433 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 C3orf14Q9HBI5 128 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 CRNNQ9UBG3 495 aaPredicted RBP15.93■□□□□ 0.14
CMTM3-213ENST00000566756 TMCC3Q9ULS5 477 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 MTCH2Q9Y6C9 303 aa15.93■□□□□ 0.14
CMTM3-213ENST00000566756 BRWD1Q9NSI6 2320 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 ANHXE9PGG2 379 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 SAP18O00422 153 aaKnown RBP15.92■□□□□ 0.14
CMTM3-213ENST00000566756 ADRB3P13945 408 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 CNR2P34972 360 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 FRKP42685 505 aaPredicted RBP15.92■□□□□ 0.14
CMTM3-213ENST00000566756 TNFRSF4P43489 277 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 CASP9P55211 416 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 SMIM11AP58511 58 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 RPA4Q13156 261 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 PUM1Q14671 1186 aaKnown RBP eCLIP15.92■□□□□ 0.14
CMTM3-213ENST00000566756 POM121L1PQ3SYA9 428 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 SLX4IPQ5VYV7 408 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 TRAPPC5Q8IUR0 188 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 SMRP1Q8NCR6 262 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 FLCNQ8NFG4 579 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 RAB7BQ96AH8 199 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 RAD51AP1Q96B01 352 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 TEFMQ96QE5 360 aaKnown RBP15.92■□□□□ 0.14
CMTM3-213ENST00000566756 CHCHD6Q9BRQ6 235 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 PITHD1Q9GZP4 211 aaPredicted RBP15.92■□□□□ 0.14
CMTM3-213ENST00000566756 KLHL25Q9H0H3 589 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 PELI2Q9HAT8 420 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 POLE4Q9NR33 117 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 TRAPPC4Q9Y296 219 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 REV3LO60673 3130 aa15.92■□□□□ 0.14
CMTM3-213ENST00000566756 C5orf58C9J3I9 102 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 FAAHO00519 579 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 SLITRK5O94991 958 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 MFN2O95140 757 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 SCG5P05408 212 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 EPHX1P07099 455 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 ERGP11308 486 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 KELP23276 732 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 CXCR2P25025 360 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 SLC13A2Q13183 592 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 ARHGAP19Q14CB8 494 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 NCF4Q15080 339 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 DUSP7Q16829 419 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 TMEM52BQ4KMG9 183 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 SPANXN2Q5MJ10 180 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 FAM46CQ5VWP2 391 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 CEACAM20Q6UY09 585 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 ERN2Q76MJ5 926 aaKnown RBP15.91■□□□□ 0.14
CMTM3-213ENST00000566756 TRMT11Q7Z4G4 463 aaKnown RBP15.91■□□□□ 0.14
CMTM3-213ENST00000566756 TRIM69Q86WT6 500 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 KRT73Q86Y46 540 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 NUS1Q96E22 293 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 QRFPRQ96P65 431 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 UCK2Q9BZX2 261 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 ZDHHC5Q9C0B5 715 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 OR2AG1Q9H205 316 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 DYRK4Q9NR20 520 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 REV1Q9UBZ9 1251 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 PCDHGB6Q9Y5F9 930 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 C5orf42Q9H799 3197 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 FFAR1O14842 300 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 KIAA0513O60268 411 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 MMP20O60882 483 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 CSTF2P33240 577 aaKnown RBP eCLIP15.91■□□□□ 0.14
CMTM3-213ENST00000566756 HSD17B2P37059 387 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 METAP1P53582 386 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 SELENBP1Q13228 472 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 HTR4Q13639 388 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 GANABQ14697 944 aaKnown RBP15.91■□□□□ 0.14
CMTM3-213ENST00000566756 HEPACAMQ14CZ8 416 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 BCL2A1Q16548 175 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 DEPDC1Q5TB30 811 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 C12orf73Q69YU5 71 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 CYP4Z2PQ8N1L4 340 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 NT5DC2Q9H857 520 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 ACAD8Q9UKU7 415 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 STON1Q9Y6Q2 735 aa15.91■□□□□ 0.14
CMTM3-213ENST00000566756 TLR4O00206 839 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 ARHGAP33O14559 1287 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 POP7O75817 140 aaKnown RBP15.9■□□□□ 0.14
CMTM3-213ENST00000566756 POU2F1P14859 743 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 CD72P21854 359 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 TIE1P35590 1138 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 GPR1P46091 355 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 LIM2P55344 173 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms