RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 MCATQ8IVS2 390 aaKnown RBP10.7□□□□□ -0.7
LINC00562-201ENST00000566385 C1orf210Q8IVY1 113 aa10.7□□□□□ -0.7
LINC00562-201ENST00000566385 CATSPER1Q8NEC5 780 aa10.7□□□□□ -0.7
LINC00562-201ENST00000566385 OR9A4Q8NGU2 314 aa10.7□□□□□ -0.7
LINC00562-201ENST00000566385 KAT2AQ92830 837 aa10.7□□□□□ -0.7
LINC00562-201ENST00000566385 COL26A1Q96A83 441 aa10.7□□□□□ -0.7
LINC00562-201ENST00000566385 HSH2DQ96JZ2 352 aa10.7□□□□□ -0.7
LINC00562-201ENST00000566385 CCDC3Q9BQI4 270 aa10.7□□□□□ -0.7
LINC00562-201ENST00000566385 TMEM38AQ9H6F2 299 aa10.7□□□□□ -0.7
LINC00562-201ENST00000566385 ZCCHC3Q9NUD5 404 aaKnown RBP10.7□□□□□ -0.7
LINC00562-201ENST00000566385 VNN3Q9NY84 501 aa10.7□□□□□ -0.7
LINC00562-201ENST00000566385 CNOT11Q9UKZ1 510 aaKnown RBP10.7□□□□□ -0.7
LINC00562-201ENST00000566385 SAMD4AQ9UPU9 718 aaKnown RBP10.7□□□□□ -0.7
LINC00562-201ENST00000566385 URADA6NGE7 173 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 RHPN2P1A8MT19 583 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 M0QX08 132 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 PLOD2O00469 737 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 B3GALT2O43825 422 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 GUCY1B2O75343 617 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 FKBP9O95302 570 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 SOX18P35713 384 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 DSTNP60981 165 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 CDK6Q00534 326 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 TNFRSF17Q02223 184 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 MED21Q13503 144 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 LAPTM4AQ15012 233 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 AMZ1Q400G9 498 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 PLK5Q496M5 336 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 INTS11Q5TA45 600 aaKnown RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 KLHL35Q6PF15 583 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 FKBP9P1Q75LS8 142 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 EIF3MQ7L2H7 374 aaKnown RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 WDR53Q7Z5U6 358 aaPredicted RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 SPRED1Q7Z699 444 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 ZDHHC21Q8IVQ6 265 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 DNAJC22Q8N4W6 341 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 TMEM105Q8N8V8 129 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 Q8N9G6 341 aaPredicted RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 SMYD1Q8NB12 490 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 OR2I1PQ8NGU4 316 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 MAGEE2Q8TD90 523 aaPredicted RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 SLC38A5Q8WUX1 472 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 PIGKQ92643 395 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 GATA6Q92908 595 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 TAMM41Q96BW9 452 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 THAP11Q96EK4 314 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 BTBD9Q96Q07 612 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 BDH2Q9BUT1 245 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 SOX17Q9H6I2 414 aaPredicted RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 UCK1Q9HA47 277 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 PILRBQ9UKJ0 227 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 SLC22A7Q9Y694 548 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 A0A1B0GTW7 788 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 PRAMEF25A6NGN4 478 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 PATE3B3GLJ2 98 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 B4GAT1O43505 415 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 GALR3O60755 368 aaPredicted RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 DEAF1O75398 565 aaPredicted RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 RDH16O75452 317 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 KRT75O95678 551 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 SEMG1P04279 462 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 BCHEP06276 602 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 PRKACGP22612 351 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 NTSP30990 170 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 BUD31P41223 144 aaPredicted RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 MC3RP41968 323 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 OR1E2P47887 323 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 KCNJ10P78508 379 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 CEBPEQ15744 281 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 IQCCQ4KMZ1 466 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 CYBRD1Q53TN4 286 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 NHSL2Q5HYW2 709 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 TSEN54Q7Z6J9 526 aaKnown RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 WDR5BQ86VZ2 330 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 NATD1Q8N6N6 113 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 C16orf58Q96GQ5 468 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 CNBD2Q96M20 576 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 BARD1Q99728 777 aaKnown RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 IER2Q9BTL4 223 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 SPATA9Q9BWV2 254 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 IL1RAPQ9NPH3 570 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 LYARQ9NX58 379 aaKnown RBP10.69□□□□□ -0.7
LINC00562-201ENST00000566385 FREM2Q5SZK8 3169 aa10.69□□□□□ -0.7
LINC00562-201ENST00000566385 IGHV1OR21-1A0A087WYE8 117 aa10.68□□□□□ -0.7
LINC00562-201ENST00000566385 A0A0A6YYC8 382 aaPredicted RBP10.68□□□□□ -0.7
LINC00562-201ENST00000566385 OR2W5A6NFC9 320 aa10.68□□□□□ -0.7
LINC00562-201ENST00000566385 I3L1I5 382 aaPredicted RBP10.68□□□□□ -0.7
LINC00562-201ENST00000566385 CYR61O00622 381 aa10.68□□□□□ -0.7
LINC00562-201ENST00000566385 HMGN2P05204 90 aaKnown RBP10.68□□□□□ -0.7
LINC00562-201ENST00000566385 GNAO1P09471 354 aa10.68□□□□□ -0.7
LINC00562-201ENST00000566385 OR12D1P0DN82 309 aa10.68□□□□□ -0.7
LINC00562-201ENST00000566385 ARAFP10398 606 aa10.68□□□□□ -0.7
LINC00562-201ENST00000566385 CSNK2A2P19784 350 aaPredicted RBP10.68□□□□□ -0.7
LINC00562-201ENST00000566385 FUT4P22083 530 aa10.68□□□□□ -0.7
LINC00562-201ENST00000566385 MAGEA2P43356 314 aa10.68□□□□□ -0.7
LINC00562-201ENST00000566385 GABRA4P48169 554 aa10.68□□□□□ -0.7
LINC00562-201ENST00000566385 SEPHS1P49903 392 aa10.68□□□□□ -0.7
LINC00562-201ENST00000566385 XKP51811 444 aa10.68□□□□□ -0.7
LINC00562-201ENST00000566385 SHC2P98077 582 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms