RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 UBE2E3Q969T4 207 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 NXNL1Q96CM4 212 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 TRIM44Q96DX7 344 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-213ENST00000565173 FBXL20Q96IG2 436 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 DGAT2Q96PD7 388 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 CNPPD1Q9BV87 410 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 PHACTR1Q9C0D0 580 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 RPF2Q9H7B2 306 aaKnown RBP7.91□□□□□ -1.14
CAPN3-213ENST00000565173 DMRT3Q9NQL9 472 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 MS4A12Q9NXJ0 267 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 NUDT4Q9NZJ9 180 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 TXNDC16Q9P2K2 825 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 COPS7AQ9UBW8 275 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 TSC22D4Q9Y3Q8 395 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 L3MBTL1Q9Y468 752 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 ASB4Q9Y574 426 aa7.91□□□□□ -1.14
CAPN3-213ENST00000565173 CHCHD2Q9Y6H1 151 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-213ENST00000565173 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.91□□□□□ -1.14
CAPN3-213ENST00000565173 INTS1Q8N201 2190 aaKnown RBP7.91□□□□□ -1.14
CAPN3-213ENST00000565173 TRGV5A0A0B4J1U4 118 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 A0A1W2PR48 441 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 HMX2A2RU54 273 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 LRRC14BA6NHZ5 514 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 LRRC3CA6NJW4 275 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 TMPRSS11DO60235 418 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 HCN1O60741 890 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 WDR1O75083 606 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 EEDO75530 441 aaKnown RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 GPR75O95800 540 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 S100BP04271 92 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 GSTA2P09210 222 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 LTA4HP09960 611 aaKnown RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 FBXO45P0C2W1 286 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 COX7A2P14406 83 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 ALOX15P16050 662 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 EPB42P16452 691 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 CRABP2P29373 138 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 SERPINB1P30740 379 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 BSGP35613 385 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 SSR2P43308 183 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 ZFP36L2P47974 494 aaKnown RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 MAN2A2P49641 1150 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 ARFIP1P53367 373 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 SLC37A1P57057 533 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 TNFRSF17Q02223 184 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 GUCY2DQ02846 1103 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 CALCOCO2Q13137 446 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 CES4AQ5XG92 561 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 ZDHHC24Q6UX98 284 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 SEM1Q6ZVN7 128 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 GPR180Q86V85 440 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 CTAGE3PQ8IX95 158 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 ST13P4Q8IZP2 240 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 CENPLQ8N0S6 344 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 LRRC25Q8N386 305 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 FBXW8Q8N3Y1 598 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 TEX9Q8N6V9 391 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 PPM1NQ8N819 430 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 C7orf57Q8NEG2 295 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 NRGNQ92686 78 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 RGMAQ96B86 450 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 SARAFQ96BY9 339 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 NTNG2Q96CW9 530 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 SPACA9Q96E40 222 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 RBM18Q96H35 190 aaKnown RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 MTERF1Q99551 399 aaKnown RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 ZNF559Q9BR84 538 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 ZNF703Q9H7S9 590 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-213ENST00000565173 NMRAL1Q9HBL8 299 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 ZFP64Q9NPA5 681 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 ACKR4Q9NPB9 350 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 OPTCQ9UBM4 332 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 ADGRE2Q9UHX3 823 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 ACAD8Q9UKU7 415 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 PCDHGB3Q9Y5G1 929 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 SPACA6W5XKT8 324 aa7.9□□□□□ -1.14
CAPN3-213ENST00000565173 NCKAP5O14513 1909 aa7.9□□□□□ -1.15
CAPN3-213ENST00000565173 A0A0A6YYD5 115 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 FAM221AA4D161 298 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 GLOD5A6NK44 160 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 SUPT3HB4E1H0 165 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 H0YIV9 168 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 TRIM3O75382 744 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-213ENST00000565173 SUPT3HO75486 399 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 C2P06681 752 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 PTX3P26022 381 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-213ENST00000565173 DNAJA1P31689 397 aaKnown RBP7.89□□□□□ -1.15
CAPN3-213ENST00000565173 GALNSP34059 522 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 MAGEA4P43358 317 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 RPS13P62277 151 aaKnown RBP7.89□□□□□ -1.15
CAPN3-213ENST00000565173 HERVK_113P63132 956 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 ERVK-8P63133 956 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 IRF9Q00978 393 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 PLIN5Q00G26 463 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 TBL3Q12788 808 aaKnown RBP7.89□□□□□ -1.15
CAPN3-213ENST00000565173 DDX39BQ13838 428 aaKnown RBP7.89□□□□□ -1.15
CAPN3-213ENST00000565173 ZNF267Q14586 743 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-213ENST00000565173 EBPQ15125 230 aaKnown RBP7.89□□□□□ -1.15
CAPN3-213ENST00000565173 NTRK2Q16620 822 aa7.89□□□□□ -1.15
CAPN3-213ENST00000565173 PFKFB4Q16877 469 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms