RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SRSF11Q05519 484 aaKnown RBP17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 OR52E8Q6IFG1 317 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 WDR93Q6P2C0 686 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 EMBQ6PCB8 327 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 GFRALQ6UXV0 394 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 COMMD6Q7Z4G1 85 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 C4orf33Q8N1A6 199 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 CYP4Z2PQ8N1L4 340 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 RIBC1Q8N443 379 aaPredicted RBP17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 RDH11Q8TC12 318 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 ZNF721Q8TF20 911 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 SREK1Q8WXA9 508 aaKnown RBP17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 ASB15Q8WXK1 588 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 UCN3Q969E3 161 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 HBEGFQ99075 208 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 SEC14L3Q9UDX4 400 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 ERVK-11Q9UQG0 969 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 KLF13Q9Y2Y9 288 aaPredicted RBP17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 V9GYY5 206 aaPredicted RBP17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 ANKRD17O75179 2603 aaKnown RBP17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 RELNP78509 3460 aa17.05■□□□□ 0.32
SYNGR3-204ENST00000564642 TMEM200CA6NKL6 621 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 A8MVJ9 347 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 ESPNB1AK53 854 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 KLRC4-KLRK1H3BQV0 150 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 PGRMC2O15173 223 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 NME2P1O60361 137 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 PLIN3O60664 434 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 ESRRBO95718 433 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 NUDT17P0C025 328 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 CPA3P15088 417 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 NME2P22392 152 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 HK2P52789 917 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 CSTF3Q12996 717 aaKnown RBP17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 CFAP157Q5JU67 520 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 TCHHL1Q5QJ38 904 aaPredicted RBP17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 NDUFAF5Q5TEU4 345 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 C16orf47Q6ZP98 133 aaPredicted RBP17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 DGAT2L6Q6ZPD8 337 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 ZNF227Q86WZ6 799 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 OR4K14Q8NGD5 310 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 RIT1Q92963 219 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 CNPPD1Q9BV87 410 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 IQCGQ9H095 443 aaKnown RBP17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 GSTO2Q9H4Y5 243 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 MID1IP1Q9NPA3 183 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 HPF1Q9NWY4 346 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 TEX10Q9NXF1 929 aaPredicted RBP17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 MID2Q9UJV3 735 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 SVILO95425 2214 aa17.04■□□□□ 0.32
SYNGR3-204ENST00000564642 RP1L1Q8IWN7 2480 aaPredicted RBP17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 ASPDHA6ND91 283 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 UNC5CO95185 931 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 SLC35E2P0CK97 266 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 NAGLUP54802 743 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 KCNK10P57789 538 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 SLC18A2Q05940 514 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 GALNT1Q10472 559 aaPredicted RBP17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 TBL3Q12788 808 aaKnown RBP17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 ZNF267Q14586 743 aaPredicted RBP17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 FAM219BQ5XKK7 198 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 IL20RBQ6UXL0 311 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 GPALPP1Q8IXQ4 340 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 C1orf52Q8N6N3 182 aaKnown RBP17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 GBP7Q8N8V2 638 aaPredicted RBP17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 DOK4Q8TEW6 326 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 AENQ8WTP8 325 aaKnown RBP17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 FBXL20Q96IG2 436 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 RASL10BQ96S79 203 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 ROPN1BQ9BZX4 212 aaPredicted RBP17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 C12orf65Q9H3J6 166 aaKnown RBP17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 ROPN1Q9HAT0 212 aaPredicted RBP17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 TIMMDC1Q9NPL8 285 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 ERRFI1Q9UJM3 462 aaPredicted RBP17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 TIMM22Q9Y584 194 aa17.03■□□□□ 0.32
SYNGR3-204ENST00000564642 C1orf226A1L170 272 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 H3BQF6 201 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 GALNSP34059 522 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 DEKP35659 375 aaKnown RBP17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 DNAJB13P59910 316 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 ERVK-8P63133 956 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 RBPJQ06330 500 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 SPRED3Q2MJR0 410 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 C4orf17Q53FE4 359 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 AGAP11Q8TF27 550 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 CHTF18Q8WVB6 975 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 CAVIN3Q969G5 261 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 FRMD6Q96NE9 622 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 FAIM2Q9BWQ8 316 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 OXSMQ9NWU1 459 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 ERVK-19Q9WJR5 959 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 PCDHA9Q9Y5H5 950 aa17.02■□□□□ 0.32
SYNGR3-204ENST00000564642 COL12A1Q99715 3063 aa17.02■□□□□ 0.31
SYNGR3-204ENST00000564642 DOPEY2Q9Y3R5 2298 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 NPIPA5E9PKD4 350 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 CRCPO75575 148 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 OR6B1O95007 311 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms