RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 CDC20BQ86Y33 519 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 LIX1Q8N485 282 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 FAM13CQ8NE31 585 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 GOT1L1Q8NHS2 421 aaPredicted RBP12.97□□□□□ -0.33
CDR2-204ENST00000564542 FAM222BQ8WU58 562 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 UBE2E3Q969T4 207 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 LRRC46Q96FV0 321 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 TSPAN17Q96FV3 270 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 KRT12Q99456 494 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 PHACTR1Q9C0D0 580 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 SLC6A15Q9H2J7 730 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 CAB39LQ9H9S4 337 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 PROK2Q9HC23 129 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 DLL4Q9NR61 685 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDR2-204ENST00000564542 MS4A12Q9NXJ0 267 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 CD274Q9NZQ7 290 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 CNIH4Q9P003 139 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 PTBP2Q9UKA9 531 aaKnown RBP12.97□□□□□ -0.33
CDR2-204ENST00000564542 PLEKHA6Q9Y2H5 1048 aa12.97□□□□□ -0.33
CDR2-204ENST00000564542 CHCHD2Q9Y6H1 151 aaPredicted RBP12.97□□□□□ -0.33
CDR2-204ENST00000564542 ABCA4P78363 2273 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 E7ESA3 106 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 HRKO00198 91 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 TP73O15350 636 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 PHGDHO43175 533 aaKnown RBP12.96□□□□□ -0.33
CDR2-204ENST00000564542 CCNT2O60583 730 aaKnown RBP12.96□□□□□ -0.33
CDR2-204ENST00000564542 BMP5P22003 454 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 SPRED3Q2MJR0 410 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 ACSF3Q4G176 576 aaPredicted RBP12.96□□□□□ -0.33
CDR2-204ENST00000564542 KHDRBS2Q5VWX1 349 aaKnown RBP12.96□□□□□ -0.33
CDR2-204ENST00000564542 MED27Q6P2C8 311 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 PAMR1Q6UXH9 720 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 DGAT2L6Q6ZPD8 337 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 CHSY3Q70JA7 882 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 OR4N5Q8IXE1 308 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 LAS2Q8IYD9 372 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 NAXEQ8NCW5 288 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 OR10G3Q8NGC4 313 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 RNASE6Q93091 150 aaKnown RBP12.96□□□□□ -0.33
CDR2-204ENST00000564542 PPWD1Q96BP3 646 aaKnown RBP12.96□□□□□ -0.33
CDR2-204ENST00000564542 MBD6Q96DN6 1003 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 RBM18Q96H35 190 aaKnown RBP12.96□□□□□ -0.33
CDR2-204ENST00000564542 GAL3ST4Q96RP7 486 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 RPF2Q9H7B2 306 aaKnown RBP12.96□□□□□ -0.33
CDR2-204ENST00000564542 DMRT3Q9NQL9 472 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 SMYD2Q9NRG4 433 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 FOXD3Q9UJU5 478 aaPredicted RBP12.96□□□□□ -0.33
CDR2-204ENST00000564542 CBLCQ9ULV8 474 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 MTO1Q9Y2Z2 717 aaKnown RBP12.96□□□□□ -0.33
CDR2-204ENST00000564542 NAV3Q8IVL0 2385 aa12.96□□□□□ -0.33
CDR2-204ENST00000564542 ABCA2Q9BZC7 2435 aa12.96□□□□□ -0.34
CDR2-204ENST00000564542 AHRRA9YTQ3 701 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 SH3BGRLO75368 114 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 TGFB1P01137 390 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 S100BP04271 92 aaPredicted RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 PCNAP12004 261 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 FOSL1P15407 271 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 ALOX15P16050 662 aaPredicted RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 STMN1P16949 149 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 GDF1P27539 372 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 SERPINB3P29508 390 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 CEACAM8P31997 349 aaPredicted RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 DGKQP52824 942 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 TNFRSF17Q02223 184 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 DUSP8Q13202 625 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 SLAMF1Q13291 335 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 NTRK2Q16620 822 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 TBCELQ5QJ74 424 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 OR4C11Q6IEV9 310 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 SLC29A4Q7RTT9 530 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 MAATS1Q7Z4T9 603 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 CAMKMTQ7Z624 323 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 LACC1Q8IV20 430 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 KLHL7Q8IXQ5 586 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 ZBED8Q8IZ13 594 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 ST13P4Q8IZP2 240 aaPredicted RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 MMP21Q8N119 569 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 TNIP2Q8NFZ5 429 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 TANKQ92844 425 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 CMTM7Q96FZ5 175 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 ZNF597Q96LX8 424 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 JSRP1Q96MG2 331 aaPredicted RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 GPR22Q99680 433 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 PELOQ9BRX2 385 aaKnown RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 DOHHQ9BU89 302 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 CD244Q9BZW8 370 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 WWTR1Q9GZV5 400 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 PRM3Q9NNZ6 103 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 TRMT1Q9NXH9 659 aaKnown RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 ZNF629Q9UEG4 869 aaPredicted RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 MTRF1LQ9UGC7 380 aaKnown RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 PHF11Q9UIL8 331 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 CNOT11Q9UKZ1 510 aaKnown RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 RNF112Q9ULX5 631 aa12.95□□□□□ -0.34
CDR2-204ENST00000564542 RPH3AQ9Y2J0 694 aaPredicted RBP12.95□□□□□ -0.34
CDR2-204ENST00000564542 C15orf38-AP3S2A0A0A6YYH1 394 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 IQANK1A0A1B0GTG1 560 aa12.94□□□□□ -0.34
CDR2-204ENST00000564542 ANKRD33BA6NCL7 494 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms