RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 EIF3KQ9UBQ5 218 aaKnown RBP3.39□□□□□ -1.87
UBR1-205ENST00000564540 ARMCX3Q9UH62 379 aaPredicted RBP3.39□□□□□ -1.87
UBR1-205ENST00000564540 CLEC4EQ9ULY5 219 aa3.39□□□□□ -1.87
UBR1-205ENST00000564540 ACEP12821 1306 aa3.39□□□□□ -1.87
UBR1-205ENST00000564540 FAM205AQ6ZU69 1335 aa3.39□□□□□ -1.87
UBR1-205ENST00000564540 RNF212BA8MTL3 300 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 TBCAO75347 108 aaKnown RBP3.38□□□□□ -1.87
UBR1-205ENST00000564540 RAD51DO75771 328 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 SLU7O95391 586 aaKnown RBP3.38□□□□□ -1.87
UBR1-205ENST00000564540 PDGFBP01127 241 aaPredicted RBP3.38□□□□□ -1.87
UBR1-205ENST00000564540 KRT6AP02538 564 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 KRT6BP04259 564 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 HSD17B1P14061 328 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 MDH2P40926 338 aaKnown RBP3.38□□□□□ -1.87
UBR1-205ENST00000564540 TNFRSF4P43489 277 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 KRT6CP48668 564 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 MEOX2P50222 304 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 ARHGAP1Q07960 439 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 GSG1Q2KHT4 349 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 WSCD2Q2TBF2 565 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 UNC50Q53HI1 259 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 VSIG1Q86XK7 387 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 KLHDC8AQ8IYD2 350 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 PRR22Q8IZ63 422 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 FAM9BQ8IZU0 186 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 ZNF525Q8N782 197 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 TRPV3Q8NET8 790 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 RAB3CQ96E17 227 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 CCDC114Q96M63 670 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 SSX3Q99909 188 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 CITED2Q99967 270 aaPredicted RBP3.38□□□□□ -1.87
UBR1-205ENST00000564540 TTYH2Q9BSA4 534 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 WWP1Q9H0M0 922 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 TNMDQ9H2S6 317 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 VPS18Q9P253 973 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 DNAJB9Q9UBS3 223 aa3.38□□□□□ -1.87
UBR1-205ENST00000564540 OOEPA6NGQ2 149 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 CCT8L1PA6NM43 557 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 FAM220BPB1ANY3 271 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 E7ENQ6 273 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 HSP90AA1P07900 732 aaKnown RBP3.37□□□□□ -1.87
UBR1-205ENST00000564540 SCG2P13521 617 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 ATP6V1B1P15313 513 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 GDF1P27539 372 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 PPP2R1BP30154 601 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 FRKP42685 505 aaPredicted RBP3.37□□□□□ -1.87
UBR1-205ENST00000564540 CXCL6P80162 114 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 SLC34A1Q06495 639 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 PPP1R3AQ16821 1122 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 ODF2Q5BJF6 829 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 MSANTD1Q6ZTZ1 278 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 VASH2Q86V25 355 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 ICA1LQ8NDH6 482 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 CDKN2AIPNLQ96HQ2 116 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 ELL3Q9HB65 397 aaPredicted RBP3.37□□□□□ -1.87
UBR1-205ENST00000564540 ZCCHC17Q9NP64 241 aaKnown RBP3.37□□□□□ -1.87
UBR1-205ENST00000564540 VNN3Q9NY84 501 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 MIS18AQ9NYP9 233 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 MLXQ9UH92 298 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 CDH7Q9ULB5 785 aa3.37□□□□□ -1.87
UBR1-205ENST00000564540 SH3PXD2BA1X283 911 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 SDR42E2A6NKP2 422 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 CDX4O14627 284 aaPredicted RBP3.36□□□□□ -1.87
UBR1-205ENST00000564540 SLC16A8O95907 504 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 GH1P01241 217 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 GSTA2P09210 222 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 P4HA1P13674 534 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 PAX2Q02962 417 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 CAPRIN1Q14444 709 aaKnown RBP3.36□□□□□ -1.87
UBR1-205ENST00000564540 MEF2DQ14814 521 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 P2RY14Q15391 338 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 LRRC38Q5VT99 294 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 Q6ZRG5 221 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 ASPGQ86U10 573 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 ITIH5Q86UX2 942 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 C17orf64Q86WR6 236 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 THEM5Q8N1Q8 247 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 FBXW8Q8N3Y1 598 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 ATAD1Q8NBU5 361 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 GGHQ92820 318 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 AGPAT1Q99943 283 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 MAPKAP1Q9BPZ7 522 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 PAXXQ9BUH6 204 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 MLPHQ9BV36 600 aaPredicted RBP3.36□□□□□ -1.87
UBR1-205ENST00000564540 NUSAP1Q9BXS6 441 aaKnown RBP3.36□□□□□ -1.87
UBR1-205ENST00000564540 TMEM161AQ9NX61 479 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 FBXL5Q9UKA1 691 aa3.36□□□□□ -1.87
UBR1-205ENST00000564540 IGKV6D-21A0A0A0MT36 114 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 H0Y9J4 135 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 GLCEO94923 617 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 EPOP01588 193 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 C8orf89P0DMQ9 161 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 CALML3P27482 149 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 SLC25A1P53007 311 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 GABPAQ06546 454 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 OR1C1Q15619 314 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 NHSL2Q5HYW2 709 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 FAM219BQ5XKK7 198 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 OTOAQ7RTW8 1153 aa3.35□□□□□ -1.87
UBR1-205ENST00000564540 OR7G3Q8NG95 312 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms