RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 JUNP05412 331 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SERPINA6P08185 405 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SMIM10L1P0DMW3 83 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 UROSP10746 265 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 PCNAP12004 261 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 NEFHP12036 1026 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ZNF28P17035 718 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 CXCR2P25025 360 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 GSTM2P28161 218 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 HNRNPH1P31943 449 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ARL1P40616 181 aaPredicted RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 MDH1P40925 334 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ITGA1P56199 1179 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 RPS13P62277 151 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 PRR5P85299 388 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 IFT88Q13099 833 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 EIF3IQ13347 325 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 TUBB3Q13509 450 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 DDX39BQ13838 428 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 IL11RAQ14626 422 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ABRAXAS2Q15018 415 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 PLEKHN1Q494U1 663 aaPredicted RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 XKR7Q5GH72 579 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 CT83Q5H943 113 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 C3orf38Q5JPI3 329 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SH2D4BQ5SQS7 431 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 WASHC2DQ5SRD0 308 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 TMTC4Q5T4D3 741 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 DEPDC1Q5TB30 811 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ATG16L1Q676U5 607 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 TTC19Q6DKK2 380 aaPredicted RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 CGB2Q6NT52 195 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 PWWP2BQ6NUJ5 590 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SCIMPQ6UWF3 145 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 RNF165Q6ZSG1 346 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 MAVSQ7Z434 540 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 CLYBLQ8N0X4 340 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 TBC1D19Q8N5T2 526 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ZNF527Q8NB42 609 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 CAMKVQ8NCB2 501 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 TRPV3Q8NET8 790 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 TTLQ8NG68 377 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 OR8K5Q8NH50 307 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 HUS1BQ8NHY5 278 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 WDR36Q8NI36 951 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 METTL6Q8TCB7 284 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 AGR3Q8TD06 166 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 TSPEARQ8WU66 669 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 TWIST2Q8WVJ9 160 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 DYDC1Q8WWB3 177 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SLC13A3Q8WWT9 602 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SELENOMQ8WWX9 145 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 UBE2E3Q969T4 207 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 MTFMTQ96DP5 389 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 RNF31Q96EP0 1072 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SMIM10Q96HG1 83 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 C7orf26Q96N11 449 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 QRFPRQ96P65 431 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ZNF317Q96PQ6 595 aaPredicted RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 F2RL3Q96RI0 385 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 MTERF1Q99551 399 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 KCNJ15Q99712 375 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 CMKLR1Q99788 373 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 CTRCQ99895 268 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ZNF717Q9BY31 904 aaPredicted RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ACPTQ9BZG2 426 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SPRY4Q9C004 299 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 STRADBQ9C0K7 418 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ILKAPQ9H0C8 392 aaPredicted RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 OR51B5Q9H339 312 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 KLHL31Q9H511 634 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 CNTD2Q9H8S5 307 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 EML4Q9HC35 981 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ASCL3Q9NQ33 180 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 LHX9Q9NQ69 397 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 THAP1Q9NVV9 213 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SLC39A1Q9NY26 324 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 AKAP7Q9P0M2 348 aaPredicted RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 PISDQ9UG56 409 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SLC13A4Q9UKG4 626 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 KLK13Q9UKR3 277 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 RARRES3Q9UL19 164 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SNX6Q9UNH7 406 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 SATB2Q9UPW6 733 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 RUVBL1Q9Y265 456 aaKnown RBP4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 DNAJC15Q9Y5T4 150 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 PTGDR2Q9Y5Y4 395 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ATRXP46100 2492 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 DMXL2Q8TDJ6 3036 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 UNC13CQ8NB66 2214 aa4.92□□□□□ -1.62
HERPUD1-207ENST00000563781 ADAMTS20P59510 1910 aa4.91□□□□□ -1.62
HERPUD1-207ENST00000563781 ZZEF1O43149 2961 aa4.91□□□□□ -1.62
HERPUD1-207ENST00000563781 MED19A0JLT2 244 aaPredicted RBP4.91□□□□□ -1.62
HERPUD1-207ENST00000563781 LRIT2A6NDA9 550 aa4.91□□□□□ -1.62
HERPUD1-207ENST00000563781 ANKDD1BA6NHY2 528 aa4.91□□□□□ -1.62
HERPUD1-207ENST00000563781 CCDC154A6NI56 674 aa4.91□□□□□ -1.62
HERPUD1-207ENST00000563781 MAGEB17A8MXT2 336 aa4.91□□□□□ -1.62
HERPUD1-207ENST00000563781 CDRT15L2A8MXV6 281 aa4.91□□□□□ -1.62
HERPUD1-207ENST00000563781 TCP11X1B4DZS4 312 aa4.91□□□□□ -1.62
HERPUD1-207ENST00000563781 NPIPB8E9PQR5 432 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms