RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 VPS41P49754 854 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 PLA2G16P53816 162 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 KCNJ2P63252 427 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 SLBPQ14493 270 aaKnown RBP eCLIP9.46□□□□□ -0.9
SF3B3-204ENST00000563739 EBPQ15125 230 aaKnown RBP9.46□□□□□ -0.9
SF3B3-204ENST00000563739 NTRK2Q16620 822 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 EIPR1Q53HC9 387 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 SLC22A10Q63ZE4 541 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 TMEM64Q6YI46 380 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 KIF18BQ86Y91 864 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 CNTN4Q8IWV2 1026 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 OR2L5Q8NG80 312 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 DAZLQ92904 295 aaKnown RBP9.46□□□□□ -0.9
SF3B3-204ENST00000563739 PERPQ96FX8 193 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 TUBA1CQ9BQE3 449 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 AIF1LQ9BQI0 150 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 TMEM79Q9BSE2 394 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 YIPF4Q9BSR8 244 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 RBM24Q9BX46 236 aaKnown RBP9.46□□□□□ -0.9
SF3B3-204ENST00000563739 CCDC68Q9H2F9 335 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 HOMER3Q9NSC5 361 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 C20orf96Q9NUD7 363 aaPredicted RBP9.46□□□□□ -0.9
SF3B3-204ENST00000563739 BOKQ9UMX3 212 aaPredicted RBP9.46□□□□□ -0.9
SF3B3-204ENST00000563739 IKBKGQ9Y6K9 419 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 CLCA3PQ9Y6N3 262 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 URADA6NGE7 173 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 GOLGA8MH3BSY2 632 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 RTCAO00442 366 aaKnown RBP9.45□□□□□ -0.9
SF3B3-204ENST00000563739 ARHGEF9O43307 516 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 PRKRAO75569 313 aaKnown RBP9.45□□□□□ -0.9
SF3B3-204ENST00000563739 CNOT4O95628 575 aaKnown RBP9.45□□□□□ -0.9
SF3B3-204ENST00000563739 IL2RAP01589 272 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 IFNA16P05015 189 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 MLNP12872 115 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 SAT1P21673 171 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 GDF1P27539 372 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 RPL21P46778 160 aaKnown RBP9.45□□□□□ -0.9
SF3B3-204ENST00000563739 PTH2RP49190 550 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 RGS4P49798 205 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 NAGLUP54802 743 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 CBLBQ13191 982 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 THOC5Q13769 683 aaKnown RBP9.45□□□□□ -0.9
SF3B3-204ENST00000563739 CRYMQ14894 314 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 FBXW10Q5XX13 1052 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 DESI1Q6ICB0 168 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 CASC4Q6P4E1 433 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 C4orf22Q6V702 233 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 LUZP2Q86TE4 346 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 P3H2Q8IVL5 708 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 IGDCC3Q8IVU1 814 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 OR4N5Q8IXE1 308 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 LMNTD2Q8IXW0 634 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 C17orf53Q8N3J3 647 aaPredicted RBP9.45□□□□□ -0.9
SF3B3-204ENST00000563739 MCUQ8NE86 351 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 HSPBAP1Q96EW2 488 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 SENP5Q96HI0 755 aaPredicted RBP9.45□□□□□ -0.9
SF3B3-204ENST00000563739 F2RL3Q96RI0 385 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 TRIB1Q96RU8 372 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 SERINC2Q96SA4 455 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 BDH2Q9BUT1 245 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 GSX2Q9BZM3 304 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 TAS2R13Q9NYV9 303 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 CLCF1Q9UBD9 225 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 C15orf41Q9Y2V0 281 aa9.45□□□□□ -0.9
SF3B3-204ENST00000563739 ANKRD33BA6NCL7 494 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 NPEPPSL1A6NEC2 478 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 WASHC1A8K0Z3 465 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 B3GALT2O43825 422 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 CLEC3AO75596 197 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 WISP3O95389 354 aaPredicted RBP9.44□□□□□ -0.9
SF3B3-204ENST00000563739 ACSL3O95573 720 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 ENO2P09104 434 aaPredicted RBP9.44□□□□□ -0.9
SF3B3-204ENST00000563739 TMIGD3P0DMS9 266 aaPredicted RBP9.44□□□□□ -0.9
SF3B3-204ENST00000563739 C1GALT1C1LP0DN25 315 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 PAX1P15863 534 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 PTPN6P29350 595 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 PTGDSP41222 190 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 STT3AP46977 705 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 SLC37A1P57057 533 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 STXBP1P61764 594 aaKnown RBP9.44□□□□□ -0.9
SF3B3-204ENST00000563739 GPS1Q13098 491 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 ZNF460Q14592 562 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 ACKR1Q16570 336 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 MSS51Q4VC12 460 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 WIPI1Q5MNZ9 446 aaPredicted RBP9.44□□□□□ -0.9
SF3B3-204ENST00000563739 TMIGD1Q6UXZ0 262 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 SLC35F6Q8N357 371 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 NAT8LQ8N9F0 302 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 ANKRD49Q8WVL7 239 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 ISL2Q96A47 359 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 PPWD1Q96BP3 646 aaKnown RBP9.44□□□□□ -0.9
SF3B3-204ENST00000563739 CTHRC1Q96CG8 243 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 FBXL20Q96IG2 436 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 ZNF597Q96LX8 424 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 RUNDC3BQ96NL0 473 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 WFIKKN1Q96NZ8 548 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 FAM167BQ9BTA0 163 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 DOHHQ9BU89 302 aa9.44□□□□□ -0.9
SF3B3-204ENST00000563739 SORBS1Q9BX66 1292 aaKnown RBP9.44□□□□□ -0.9
SF3B3-204ENST00000563739 WWTR1Q9GZV5 400 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms