RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 MYH15Q9Y2K3 1946 aa4.52□□□□□ -1.69
SMG1-207ENST00000563235 OR2AT4A6NND4 320 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 SOBPA7XYQ1 873 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ZNF99A8MXY4 864 aaPredicted RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 TMEM114B3SHH9 223 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 E9PQ18 207 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 TM9SF1O15321 606 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 PEX10O60683 326 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 GPIP06744 558 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 CRYGBP07316 175 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ERCC1P07992 297 aaPredicted RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 GSTM2P28161 218 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 BMP8BP34820 402 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 KCNJ3P48549 501 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ERVS71-1P61550 626 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 TRAF2Q12933 501 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 BNIP3Q12983 259 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 STX1AQ16623 288 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 CDO1Q16878 200 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 PTCHD3Q3KNS1 767 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 MTX3Q5HYI7 312 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 CTSL3PQ5NE16 218 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 EEF1DP3Q658K8 133 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 GLB1LQ6UWU2 654 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 MOB3CQ70IA8 216 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 C17orf78Q8N4C9 275 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 TTC9BQ8N6N2 239 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 TSPAN14Q8NG11 270 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 TCP10LQ8TDR4 215 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 WFIKKN2Q8TEU8 576 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ZNF480Q8WV37 535 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ACOT11Q8WXI4 607 aaPredicted RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 P3H4Q92791 437 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 LHX4Q969G2 390 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 SLCO4A1Q96BD0 722 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 OTUB1Q96FW1 271 aaPredicted RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 AKR1E2Q96JD6 320 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 WRAP53Q9BUR4 548 aaKnown RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 MCRIP2Q9BUT9 160 aaKnown RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 RBM24Q9BX46 236 aaKnown RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 OSBPL1AQ9BXW6 950 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 SPATC1LQ9H0A9 340 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 DPEP3Q9H4B8 488 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ASB7Q9H672 318 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ZFAND3Q9H8U3 227 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ACTR5Q9H9F9 607 aaPredicted RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 ABCB9Q9NP78 766 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 OR2S2Q9NQN1 319 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 UFSP2Q9NUQ7 469 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 FAM105AQ9NUU6 356 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 DDX19AQ9NUU7 478 aaKnown RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 ZDHHC8Q9ULC8 765 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 DIMT1Q9UNQ2 313 aaKnown RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 FOXJ3Q9UPW0 622 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 TSSC4Q9Y5U2 329 aaPredicted RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 KIF1AQ12756 1690 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 KDM6AO15550 1401 aaPredicted RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 MGAT4DA6NG13 374 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 KCNU1A8MYU2 1149 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 SYF2O95926 243 aaKnown RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 PGK1P00558 417 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 GP1BAP07359 652 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 MYL6BP14649 208 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ACKR3P25106 362 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ECHS1P30084 290 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 KIR2DL1P43626 348 aaPredicted RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 OMPP47874 163 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 MYL7Q01449 175 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 PAX5Q02548 391 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 SPEM2Q0P670 501 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 CDK5R2Q13319 367 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ORC2Q13416 577 aaPredicted RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 SLC9A3R2Q15599 337 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 TSC22D1Q15714 1073 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 CARTPTQ16568 116 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 EXOC3L2Q2M3D2 409 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 SBK1Q52WX2 424 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 MARC1Q5VT66 337 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 TIGD3Q6B0B8 471 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 EFCAB12Q6NXP0 572 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 KCNIP4Q6PIL6 250 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 B3GLCTQ6Y288 498 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 IDO2Q6ZQW0 420 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 BBS7Q8IWZ6 715 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 ADGRG5Q8IZF4 528 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 APCDD1Q8J025 514 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 FAM83FQ8NEG4 500 aaPredicted RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 OR6Q1Q8NGQ2 317 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 NUDCD2Q8WVJ2 157 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 UTP4Q969X6 686 aaKnown RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 MARC2Q969Z3 335 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 TMEM143Q96AN5 459 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 GLT1D1Q96MS3 346 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 SLC46A1Q96NT5 459 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 MUS81Q96NY9 551 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 P2RY13Q9BPV8 354 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 GTPBP2Q9BX10 602 aaKnown RBP4.51□□□□□ -1.69
SMG1-207ENST00000563235 NMNAT2Q9BZQ4 307 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 XPNPEP1Q9NQW7 623 aa4.51□□□□□ -1.69
SMG1-207ENST00000563235 EXD2Q9NVH0 621 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms