RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 MS4A12Q9NXJ0 267 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 NUDT4Q9NZJ9 180 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 PHF11Q9UIL8 331 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 ANGPTL3Q9Y5C1 460 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 ZNF407Q9C0G0 2248 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 C15orf38-AP3S2A0A0A6YYH1 394 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 HSPB2A8KAH6 182 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 CCDC188H7C350 402 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 HRKO00198 91 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 TP73O15350 636 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 CTAG2O75638 210 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 SCELO95171 688 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 IGKV3-11P04433 115 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 RFPL3SP0C7P2 107 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 ALOX15P16050 662 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-202ENST00000562722 EPORP19235 508 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 ENDOUP21128 410 aaKnown RBP11.96□□□□□ -0.49
SF3B3-202ENST00000562722 GDF1P27539 372 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 GP5P40197 560 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 BUD31P41223 144 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-202ENST00000562722 GNG11P61952 73 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 HERVK_113P63132 956 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 ERVK-8P63133 956 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 MRPS25P82663 173 aaKnown RBP11.96□□□□□ -0.49
SF3B3-202ENST00000562722 TNFRSF17Q02223 184 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 ZNF267Q14586 743 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-202ENST00000562722 HSPB2Q16082 182 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 RIPPLY2Q5TAB7 128 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 RNF111Q6ZNA4 994 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 TBC1D1Q86TI0 1168 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-202ENST00000562722 GPR180Q86V85 440 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 CREG2Q8IUH2 290 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 LAS2Q8IYD9 372 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 DND1Q8IYX4 353 aaKnown RBP11.96□□□□□ -0.49
SF3B3-202ENST00000562722 RNF175Q8N4F7 328 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 SLC15A4Q8N697 577 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 OR7G3Q8NG95 312 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 OR10G3Q8NGC4 313 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 PAQR8Q8TEZ7 354 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 TANKQ92844 425 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 NINJ1Q92982 152 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 RMND5BQ96G75 393 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-202ENST00000562722 FBXL20Q96IG2 436 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 FOXC2Q99958 501 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 GPATCH1Q9BRR8 931 aaKnown RBP11.96□□□□□ -0.49
SF3B3-202ENST00000562722 DOHHQ9BU89 302 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 ERVK-6Q9BXR3 956 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 DPH5Q9H2P9 285 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 CLEC4MQ9H2X3 399 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-202ENST00000562722 CNIH4Q9P003 139 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 ERVK-19Q9WJR5 959 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 SAR1BQ9Y6B6 198 aa11.96□□□□□ -0.49
SF3B3-202ENST00000562722 PHF3Q92576 2039 aaKnown RBP11.96□□□□□ -0.5
SF3B3-202ENST00000562722 TCRBV9S1A1TA0A576 114 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 LRRC3CA6NJW4 275 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 GLOD5A6NK44 160 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 K7EPI3 171 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 UBXN8O00124 270 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 PRKRAO75569 313 aaKnown RBP11.95□□□□□ -0.5
SF3B3-202ENST00000562722 EPB42P16452 691 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 BMP5P22003 454 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 DNASE1P24855 282 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 SPRP35270 261 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-202ENST00000562722 GMPRP36959 345 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 PEX19P40855 299 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 CASP2P42575 452 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 PHEXP78562 749 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 IGLV3-21P80748 117 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-202ENST00000562722 BIKQ13323 160 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 CEBPEQ15744 281 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 ZKSCAN8Q15776 578 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-202ENST00000562722 DEPDC1Q5TB30 811 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 FBXW10Q5XX13 1052 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 C18orf63Q68DL7 685 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 GRHL2Q6ISB3 625 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 DGAT2L6Q6ZPD8 337 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 ULK2Q8IYT8 1036 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 ST13P4Q8IZP2 240 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-202ENST00000562722 TAGAPQ8N103 731 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 TEX9Q8N6V9 391 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 GOT1L1Q8NHS2 421 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-202ENST00000562722 HUS1BQ8NHY5 278 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 NEIL3Q8TAT5 605 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 RIT1Q92963 219 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 MTERF1Q99551 399 aaKnown RBP11.95□□□□□ -0.5
SF3B3-202ENST00000562722 NAPGQ99747 312 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-202ENST00000562722 PELOQ9BRX2 385 aaKnown RBP11.95□□□□□ -0.5
SF3B3-202ENST00000562722 WWTR1Q9GZV5 400 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 NMRAL1Q9HBL8 299 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 SH2D2AQ9NP31 389 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 CRIM1Q9NZV1 1036 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 ADGRE2Q9UHX3 823 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 ST6GALNAC2Q9UJ37 374 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 EDARQ9UNE0 448 aa11.95□□□□□ -0.5
SF3B3-202ENST00000562722 SETD2Q9BYW2 2564 aaPredicted RBP11.95□□□□□ -0.5
SF3B3-202ENST00000562722 PLPP1O14494 284 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 DVL2O14641 736 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 TRAPPC6AO75865 159 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 FBXO45P0C2W1 286 aa11.94□□□□□ -0.5
SF3B3-202ENST00000562722 NR2F6P10588 404 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms