RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 C17orf62Q9BQA9 187 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 CCM2Q9BSQ5 444 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 CCDC28BQ9BUN5 200 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 THUMPD3Q9BV44 507 aaKnown RBP2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 S100A14Q9HCY8 104 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 DEPPQ9NTK1 212 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 THYN1Q9P016 225 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 VPS18Q9P253 973 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 GPR132Q9UNW8 380 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 RGPD1P0DJD0 1748 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 NWD2Q9ULI1 1742 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 DCCP43146 1447 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 RREB1Q92766 1687 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 ALS2Q96Q42 1657 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 NUP155O75694 1391 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 PIK3R4Q99570 1358 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 IGHV3-16A0A0C4DH30 117 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 A0A1B0GTH9 108 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 BCLAF3A2AJT9 711 aaKnown RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 CCDC162PA2VCL2 907 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 ANKDD1BA6NHY2 528 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 TMCO5BA8MYB1 307 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 TXNL1O43396 289 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 RAD51DO75771 328 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 LETM1O95202 739 aaPredicted RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 MT-ND1P03886 318 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 HSP90AB1P08238 724 aaKnown RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 BCL3P20749 454 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 CCND3P30281 292 aaPredicted RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 SLC1A4P43007 532 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 PRELPP51888 382 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 AKAP17AQ02040 695 aaKnown RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 SLC3A1Q07837 685 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 RBBP4Q09028 425 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 GPR50Q13585 617 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 FASTKQ14296 549 aaKnown RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 POM121L1PQ3SYA9 428 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 FAM133BQ5BKY9 247 aaKnown RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 ZNF776Q68DI1 518 aaPredicted RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 PM20D1Q6GTS8 502 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 SHQ1Q6PI26 577 aaKnown RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 FAM47EQ6ZV65 393 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 NLRP14Q86W24 1093 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 LRRC49Q8IUZ0 686 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 TBC1D10CQ8IV04 446 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 GPD1LQ8N335 351 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 CARNMT1Q8N4J0 409 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 BANPQ8N9N5 519 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 NHLRC2Q8NBF2 726 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 OR4Q3Q8NH05 313 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 C8orf46Q8TAG6 207 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 CD99L2Q8TCZ2 262 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 LIPHQ8WWY8 451 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 SLC35C1Q96A29 364 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 RFT1Q96AA3 541 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 NABP1Q96AH0 204 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 CCDC114Q96M63 670 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 ZMAT2Q96NC0 199 aaKnown RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 MLPHQ9BV36 600 aaPredicted RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 IDI2Q9BXS1 227 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 PNNQ9H307 717 aaKnown RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 MARCH7Q9H992 704 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 PLEKHA3Q9HB20 300 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 TUFT1Q9NNX1 390 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 ZNF581Q9P0T4 197 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 CDH7Q9ULB5 785 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 MGAT4AQ9UM21 535 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 HBS1LQ9Y450 684 aaKnown RBP2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 SLIT2O94813 1529 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 PTCH1Q13635 1447 aa2.41□□□□□ -2.02
HDGFL3-202ENST00000562702 KNDC1Q76NI1 1749 aa2.4□□□□□ -2.02
HDGFL3-202ENST00000562702 IGLON5A6NGN9 336 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 OOEPA6NGQ2 149 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 ANHXE9PGG2 379 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 M0R296 226 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 FBP2O00757 339 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 PSMA7O14818 248 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 P2RX6O15547 441 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 ST8SIA3O43173 380 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 PHF1O43189 567 aaPredicted RBP2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 IGHG1P01857 330 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 MELTFP08582 738 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 ACKR3P25106 362 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 SLC1A6P48664 564 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 GSK3BP49841 420 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 PEX3P56589 373 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 TRA2BP62995 288 aaKnown RBP2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 IQCCQ4KMZ1 466 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 TEX35Q5T0J7 233 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 MPP7Q5T2T1 576 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 RNLSQ5VYX0 342 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 ALKBH5Q6P6C2 394 aaKnown RBP2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 EMBQ6PCB8 327 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 REG3GQ6UW15 175 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 BAIAP2L2Q6UXY1 529 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 GLRX5Q86SX6 157 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 RPAINQ86UA6 219 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 RTL3Q8N8U3 475 aaKnown RBP2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 ATAD1Q8NBU5 361 aa2.4□□□□□ -2.03
HDGFL3-202ENST00000562702 UXS1Q8NBZ7 420 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms