RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ING2Q9H160 280 aa9.15□□□□□ -0.94
CLK3-208ENST00000562626 ZBTB20Q9HC78 741 aaPredicted RBP9.15□□□□□ -0.94
CLK3-208ENST00000562626 MYNNQ9NPC7 610 aa9.15□□□□□ -0.94
CLK3-208ENST00000562626 SLAMF7Q9NQ25 335 aa9.15□□□□□ -0.94
CLK3-208ENST00000562626 PNO1Q9NRX1 252 aaKnown RBP9.15□□□□□ -0.94
CLK3-208ENST00000562626 FAM53CQ9NYF3 392 aa9.15□□□□□ -0.94
CLK3-208ENST00000562626 BOD1L1Q8NFC6 3051 aa9.15□□□□□ -0.95
CLK3-208ENST00000562626 NSG1A0A0A6YYJ2 146 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 C1orf226A1L170 272 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 SAGE2PA6NJ88 616 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 A6NL46 340 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 C9JVG2 144 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 ANKRD28O15084 1053 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 PRKNO60260 465 aaPredicted RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 NME6O75414 186 aaPredicted RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 MYO1DO94832 1006 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 SNUPNO95149 360 aaKnown RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 DDAH2O95865 285 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 FAM87AP0C7U9 286 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 EFNA1P20827 205 aaPredicted RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 FEN1P39748 380 aaKnown RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 SLC26A5P58743 744 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 TRA2BP62995 288 aaKnown RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 MGAT2Q10469 447 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 STX4Q12846 297 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 DUSP8Q13202 625 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 LTB4RQ15722 352 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 ATP6AP1LQ52LC2 224 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 EPGNQ6UW88 154 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 NDUFAF7Q7L592 441 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 TICAM1Q8IUC6 712 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 CRLF3Q8IUI8 442 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 APLFQ8IW19 511 aaPredicted RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 FNDC5Q8NAU1 212 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 FDCSPQ8NFU4 85 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 SUN3Q8TAQ9 357 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 FAM76AQ8TAV0 307 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 METTL21AQ8WXB1 218 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 THAP4Q8WY91 577 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 TANKQ92844 425 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 CIDECQ96AQ7 238 aaPredicted RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 EXOSC8Q96B26 276 aaKnown RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 KLHL29Q96CT2 875 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 TEX37Q96LM6 180 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 PPP3R2Q96LZ3 170 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 BBC3Q96PG8 261 aaPredicted RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 CCT7Q99832 543 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 NUDT9Q9BW91 350 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 SEMA4CQ9C0C4 833 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 ANKRA2Q9H9E1 313 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 KCNK13Q9HB14 408 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 FGFR1OP2Q9NVK5 253 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 MS4A12Q9NXJ0 267 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 VTI1BQ9UEU0 232 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 MRPS33Q9Y291 106 aaKnown RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 SPACA6W5XKT8 324 aa9.14□□□□□ -0.95
CLK3-208ENST00000562626 SPENQ96T58 3664 aaKnown RBP9.14□□□□□ -0.95
CLK3-208ENST00000562626 GABRR3A8MPY1 467 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 C17orf105B2RV13 164 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 PEX12O00623 359 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 CLDN4O14493 209 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 DIAPH2O60879 1101 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 ERAL1O75616 437 aaKnown RBP9.13□□□□□ -0.95
CLK3-208ENST00000562626 CEACAM4O75871 244 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 CYC1P08574 325 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 CPMP14384 443 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 LBPP18428 481 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 DDCP20711 480 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 IL12AP29459 219 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 TLX1P31314 330 aaPredicted RBP9.13□□□□□ -0.95
CLK3-208ENST00000562626 STT3AP46977 705 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 ZFP36L2P47974 494 aaKnown RBP9.13□□□□□ -0.95
CLK3-208ENST00000562626 IDH3AP50213 366 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 CCL11P51671 97 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 XKP51811 444 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 POLE2P56282 527 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 NME5P56597 212 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 ERVK-8P63133 956 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 EMX2Q04743 252 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 PDE7AQ13946 482 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 LY6DQ14210 128 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 BTBD16Q32M84 506 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 LSM12Q3MHD2 195 aaKnown RBP9.13□□□□□ -0.95
CLK3-208ENST00000562626 B3GNTL1Q67FW5 361 aaPredicted RBP9.13□□□□□ -0.95
CLK3-208ENST00000562626 FCRLBQ6BAA4 426 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 OGFOD2Q6N063 350 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 BORAQ6PGQ7 559 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 FAM111BQ6SJ93 734 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 C16orf47Q6ZP98 133 aaPredicted RBP9.13□□□□□ -0.95
CLK3-208ENST00000562626 RIMKLAQ8IXN7 391 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 LRRC34Q8IZ02 419 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 TMEM132CQ8N3T6 1108 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 GALNT16Q8N428 558 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 ARFGAP2Q8N6H7 521 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 APCDD1LQ8NCL9 501 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 ADCY4Q8NFM4 1077 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 OR7A2PQ8NGA2 310 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 BRIX1Q8TDN6 353 aaKnown RBP9.13□□□□□ -0.95
CLK3-208ENST00000562626 ZNF721Q8TF20 911 aa9.13□□□□□ -0.95
CLK3-208ENST00000562626 NCLNQ969V3 563 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms